Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-1012P-201ENST00000516606 109 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.81□□□□□ -1.8
SRGAP3O43295 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 MIR4325-201ENST00000583049 90 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 U2.14-201ENST00000615943 113 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
SRGAP3O43295 AC007785.2-201ENST00000598627 1916 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SRGAP3O43295 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SRGAP3O43295 AC073325.2-201ENST00000339545 159 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 MIR22-201ENST00000362190 85 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 Y_RNA.83-201ENST00000363005 113 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 SNORD58.1-201ENST00000391313 66 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AL139156.1-201ENST00000412785 841 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AL445305.1-201ENST00000432577 575 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 Z82210.1-201ENST00000440037 231 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 CYCSP32-201ENST00000440548 321 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AC009296.1-201ENST00000443146 155 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AC009237.8-201ENST00000445492 379 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AL645939.1-201ENST00000453429 797 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AP002884.2-201ENST00000471647 395 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 RN7SL20P-201ENST00000488827 297 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 RNU6-1073P-201ENST00000517182 106 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AC010928.2-201ENST00000588017 287 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AC136601.2-201ENST00000604356 474 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AC091953.5-201ENST00000622919 233 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 AC241585.2-209ENST00000638217 143 ntBASIC3.8□□□□□ -1.8
SRGAP3O43295 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.8□□□□□ -1.8
SRGAP3O43295 AC008568.2-201ENST00000623862 2313 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.79□□□□□ -1.8
SRGAP3O43295 RNU6-879P-201ENST00000364328 108 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 RNU6-886P-201ENST00000384319 105 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 RNU6-843P-201ENST00000384454 104 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 MIR128-1-201ENST00000384921 82 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 SNORA48.2-201ENST00000390926 124 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 UBA52P6-201ENST00000399822 382 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.79□□□□□ -1.8
SRGAP3O43295 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.79□□□□□ -1.8
SRGAP3O43295 NDUFB4P10-201ENST00000452541 359 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 AC068657.1-201ENST00000520807 306 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.79□□□□□ -1.8
SRGAP3O43295 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.79□□□□□ -1.8
SRGAP3O43295 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.79□□□□□ -1.8
SRGAP3O43295 AL162274.2-201ENST00000614406 332 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 SCARNA4-201ENST00000629045 128 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.79□□□□□ -1.8
SRGAP3O43295 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.79□□□□□ -1.8
SRGAP3O43295 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRGAP3O43295 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SRGAP3O43295 HAUS6P2-201ENST00000433254 2404 ntBASIC3.79□□□□□ -1.8
SRGAP3O43295 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
SRGAP3O43295 RNU6-290P-201ENST00000365212 101 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 SNORD6-201ENST00000365444 73 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 RNU6-658P-201ENST00000384606 106 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 MIR32-201ENST00000384965 70 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 SNORA48.5-201ENST00000391143 135 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 U3.37-201ENST00000408528 213 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.78□□□□□ -1.8
SRGAP3O43295 Y_RNA.644-201ENST00000459006 113 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 RPL31P13-201ENST00000484151 370 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 RNU6-496P-201ENST00000516145 99 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 Y_RNA.674-201ENST00000516362 113 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 AP004607.1-201ENST00000524456 203 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.78□□□□□ -1.8
SRGAP3O43295 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.78□□□□□ -1.8
SRGAP3O43295 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRGAP3O43295 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
SRGAP3O43295 Y_RNA.199-201ENST00000364014 102 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 SNORA71.1-201ENST00000364523 117 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 RNU6-140P-201ENST00000384566 108 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRGAP3O43295 AL033519.2-201ENST00000403958 392 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SRGAP3O43295 AC117440.1-201ENST00000474107 571 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 RPL23AP75-201ENST00000491601 451 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 SNORA43.2-201ENST00000516652 128 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.77□□□□□ -1.81
SRGAP3O43295 AC024405.2-202ENST00000532731 184 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.77□□□□□ -1.81
SRGAP3O43295 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.77□□□□□ -1.81
SRGAP3O43295 MIR4643-201ENST00000577473 78 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 AC127459.3-201ENST00000624328 466 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.77□□□□□ -1.81
SRGAP3O43295 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.77□□□□□ -1.81
SRGAP3O43295 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.77□□□□□ -1.81
SRGAP3O43295 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRGAP3O43295 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRGAP3O43295 RNU4-90P-201ENST00000362773 141 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 RNU6-898P-201ENST00000365627 104 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 RNU6-17P-201ENST00000384245 107 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 RNU6-18P-201ENST00000384527 107 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 MIR483-201ENST00000385070 76 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.76□□□□□ -1.81
SRGAP3O43295 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.76□□□□□ -1.81
SRGAP3O43295 RPS15AP7-201ENST00000439294 405 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 H3F3AP1-201ENST00000559984 334 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms