Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL590135.1-201ENST00000422215 156 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC019205.3-201ENST00000424573 156 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC016700.2-201ENST00000446011 156 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC013470.1-201ENST00000453438 462 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC015911.1-201ENST00000495111 156 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 RNU6-415P-201ENST00000516252 97 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.42□□□□□ -2.18
CLOCKO15516 AC110760.3-201ENST00000598794 467 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 MIR98-201ENST00000606724 119 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 uc_338.11-201ENST00000619132 160 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 AF246928.1-201ENST00000623768 87 ntBASIC1.42□□□□□ -2.18
CLOCKO15516 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLOCKO15516 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.41□□□□□ -2.18
CLOCKO15516 RNU6-428P-201ENST00000362942 107 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 RNU4-56P-201ENST00000364700 142 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 RNU6-1029P-201ENST00000384109 107 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 Y_RNA.480-201ENST00000384364 102 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 MIR1-2-201ENST00000384961 85 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.41□□□□□ -2.18
CLOCKO15516 MTCO3P46-201ENST00000425787 232 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AC078809.1-201ENST00000427601 140 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 RPL31P35-201ENST00000431058 377 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 VN1R108P-201ENST00000431580 830 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.41□□□□□ -2.18
CLOCKO15516 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.41□□□□□ -2.18
CLOCKO15516 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.41□□□□□ -2.18
CLOCKO15516 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.41□□□□□ -2.18
CLOCKO15516 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.41□□□□□ -2.18
CLOCKO15516 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.41□□□□□ -2.18
CLOCKO15516 MIR4498-201ENST00000577599 66 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.41□□□□□ -2.18
CLOCKO15516 AC091805.2-201ENST00000603848 235 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AC107304.1-201ENST00000604229 296 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AL356157.2-201ENST00000605122 111 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AC006566.1-201ENST00000608943 513 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
CLOCKO15516 AC022418.1-201ENST00000624118 445 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AC120349.3-201ENST00000624377 529 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 AC022513.1-201ENST00000624512 117 ntBASIC1.41□□□□□ -2.18
CLOCKO15516 RNU6-393P-201ENST00000384475 107 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 RPS29P13-201ENST00000402041 169 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 RN7SKP61-201ENST00000410642 295 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.4□□□□□ -2.19
CLOCKO15516 CYCSP46-201ENST00000423569 204 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.4□□□□□ -2.19
CLOCKO15516 AMD1P1-201ENST00000457220 922 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 MTCO2P6-201ENST00000463134 685 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AL163540.1-201ENST00000485382 386 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AC079140.5-201ENST00000507882 310 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AC025465.3-201ENST00000510570 311 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.4□□□□□ -2.19
CLOCKO15516 RNU6-759P-201ENST00000516740 103 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 SNORA31.16-201ENST00000516773 139 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.4□□□□□ -2.19
CLOCKO15516 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AC109446.1-201ENST00000566172 220 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.4□□□□□ -2.19
CLOCKO15516 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
CLOCKO15516 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 RNU6-112P-201ENST00000363599 104 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 SNORD32A-201ENST00000364805 84 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 RNU4-48P-201ENST00000365559 182 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 RNU6-434P-201ENST00000384376 107 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 MTCO3P41-201ENST00000414801 328 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.39□□□□□ -2.19
CLOCKO15516 MTCO1P44-201ENST00000441935 243 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 PRPS1P1-201ENST00000445305 876 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 RPS29P15-201ENST00000458329 171 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC087477.1-201ENST00000465747 340 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC079382.1-201ENST00000493346 557 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 MTCYBP35-201ENST00000503630 1137 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC114801.2-201ENST00000503825 781 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC021146.2-201ENST00000504736 556 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.39□□□□□ -2.19
CLOCKO15516 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.39□□□□□ -2.19
CLOCKO15516 HSPE1P4-201ENST00000550617 308 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.39□□□□□ -2.19
CLOCKO15516 MIR3923-201ENST00000579521 83 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 AC012507.3-201ENST00000603556 477 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 Z84480.1-201ENST00000605131 311 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 MTND5P9-201ENST00000503854 1755 ntBASIC1.39□□□□□ -2.19
CLOCKO15516 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CLOCKO15516 MIR340-201ENST00000362125 95 ntBASIC1.38□□□□□ -2.19
CLOCKO15516 Y_RNA.4-201ENST00000362333 112 ntBASIC1.38□□□□□ -2.19
CLOCKO15516 SNORD70.1-201ENST00000391007 85 ntBASIC1.38□□□□□ -2.19
CLOCKO15516 RNA5SP201-201ENST00000410316 124 ntBASIC1.38□□□□□ -2.19
CLOCKO15516 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.38□□□□□ -2.19
CLOCKO15516 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.38□□□□□ -2.19
CLOCKO15516 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CLOCKO15516 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
CLOCKO15516 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.38□□□□□ -2.19
CLOCKO15516 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms