Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.44□□□□□ -2.34
HMGB3O15347 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.44□□□□□ -2.34
HMGB3O15347 RNU7-14P-201ENST00000459331 62 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AL049829.1-201ENST00000465411 156 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 RNU6-1098P-201ENST00000516772 96 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AC068587.4-201ENST00000533893 186 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AC004812.1-201ENST00000540773 146 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AC087883.1-201ENST00000551882 391 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 CYP4A27P-201ENST00000567218 190 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AC006386.1-201ENST00000619436 415 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 AP002782.1-201ENST00000623107 614 ntBASIC0.44□□□□□ -2.34
HMGB3O15347 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HMGB3O15347 MIR373-201ENST00000362273 69 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RNU6-527P-201ENST00000363425 104 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RNU6-371P-201ENST00000364283 108 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RNU5E-7P-201ENST00000365290 117 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RNU6-723P-201ENST00000383973 107 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 HMGN1P14-201ENST00000412459 517 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 HIGD1AP15-201ENST00000416198 280 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 AC060773.1-201ENST00000421698 310 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGB3O15347 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGB3O15347 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGB3O15347 MTND1P32-201ENST00000433043 938 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGB3O15347 AC245047.7-201ENST00000440265 293 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 AC007327.1-201ENST00000447461 264 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGB3O15347 AC007547.1-201ENST00000462177 490 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 BET1P1-201ENST00000482276 359 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGB3O15347 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RNA5SP384-201ENST00000516615 116 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HMGB3O15347 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGB3O15347 U4.7-201ENST00000638126 106 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.43□□□□□ -2.34
HMGB3O15347 Y_RNA.46-201ENST00000362695 102 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 RNY4P24-201ENST00000362735 96 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 Y_RNA.363-201ENST00000365529 113 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 RNU6-413P-201ENST00000384115 107 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AF228730.1-201ENST00000397972 663 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 RPL22P18-201ENST00000417197 377 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AC011233.1-201ENST00000422812 283 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 RPL23AP95-201ENST00000426806 265 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 CETN4P-201ENST00000432407 469 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGB3O15347 AC011406.1-201ENST00000512440 370 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AP002453.2-201ENST00000533503 320 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGB3O15347 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGB3O15347 AC015712.3-201ENST00000559380 164 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 MTND4LP25-201ENST00000570218 163 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGB3O15347 AC098848.2-201ENST00000588023 330 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AP001596.2-201ENST00000608410 312 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AC021506.2-201ENST00000612354 169 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 AC097372.5-201ENST00000623665 376 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 MIR338-201ENST00000636369 67 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 MTND4P14-201ENST00000435799 1354 ntBASIC0.42□□□□□ -2.34
HMGB3O15347 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGB3O15347 SNORA72.2-201ENST00000365028 127 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 RNU6-969P-201ENST00000383900 105 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 RNA5SP111-201ENST00000411386 101 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.41□□□□□ -2.34
HMGB3O15347 AC243964.1-201ENST00000441814 261 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 RNU7-34P-201ENST00000459394 64 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC098869.1-201ENST00000481627 292 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC067942.3-201ENST00000512025 362 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC013828.2-201ENST00000532487 235 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC123904.2-201ENST00000548059 300 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC021231.3-201ENST00000558497 370 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 MIR5697-201ENST00000578045 78 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC068790.6-201ENST00000602558 258 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AL158032.1-201ENST00000605401 106 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 PCGEM1.1-201ENST00000613431 131 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AC006927.4-201ENST00000639187 543 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 AL445523.1-201ENST00000451184 1362 ntBASIC0.41□□□□□ -2.34
HMGB3O15347 RNU1-76P-201ENST00000362903 159 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 U3.9-201ENST00000363823 204 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 RNU6-105P-201ENST00000363909 104 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 RNU6-1141P-201ENST00000364520 107 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 MIR942-201ENST00000401111 86 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC006366.1-201ENST00000422002 759 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.4□□□□□ -2.35
HMGB3O15347 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.4□□□□□ -2.35
HMGB3O15347 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGB3O15347 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.4□□□□□ -2.35
HMGB3O15347 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms