Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC100812.1-201ENST00000607622 580 ntBASIC-0.05□□□□□ -2.42
CHD1O14646 SNORD3E-201ENST00000362899 217 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 RNU4-45P-201ENST00000365469 141 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 RNU6-622P-201ENST00000384272 103 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 AL669831.1-202ENST00000428504 417 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 USP9YP22-201ENST00000438971 294 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.06□□□□□ -2.42
CHD1O14646 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.06□□□□□ -2.42
CHD1O14646 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 AL513534.2-201ENST00000603836 250 ntBASIC-0.06□□□□□ -2.42
CHD1O14646 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 RNU6-28P-201ENST00000362378 107 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 RNU6-514P-201ENST00000384208 107 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 CALM2P3-201ENST00000400429 449 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AL133264.1-201ENST00000407157 562 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.07□□□□□ -2.42
CHD1O14646 AC069257.2-201ENST00000441819 155 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.07□□□□□ -2.42
CHD1O14646 RPL39P38-201ENST00000467018 153 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 SUMO2P18-201ENST00000518873 252 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.07□□□□□ -2.42
CHD1O14646 AL590229.1-201ENST00000603497 542 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AC090617.9-201ENST00000623751 147 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.07□□□□□ -2.42
CHD1O14646 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.07□□□□□ -2.42
CHD1O14646 CASC19-280ENST00000642102 1351 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 SNORA63D-201ENST00000364359 132 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 U8.7-201ENST00000364940 136 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 MIR635-201ENST00000384830 98 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.07□□□□□ -2.42
CHD1O14646 RPS15AP10-201ENST00000432472 382 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 HMGN2P34-201ENST00000437647 269 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AC005094.1-201ENST00000440420 368 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 FABP5P15-201ENST00000453566 214 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 SNORA68.3-201ENST00000515906 83 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 RNA5SP135-201ENST00000517019 125 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 RNA5SP437-201ENST00000517249 129 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AL136520.1-202ENST00000555494 763 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
CHD1O14646 AL158211.1-201ENST00000566763 763 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 MIR3678-201ENST00000578455 94 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.07□□□□□ -2.42
CHD1O14646 SNORD49B-201ENST00000365172 72 ntBASIC-0.08□□□□□ -2.42
CHD1O14646 RNA5SP390-201ENST00000410191 113 ntBASIC-0.08□□□□□ -2.42
CHD1O14646 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD1O14646 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHD1O14646 AL590556.1-201ENST00000423231 483 ntBASIC-0.08□□□□□ -2.42
CHD1O14646 AL353752.1-201ENST00000454946 260 ntBASIC-0.08□□□□□ -2.42
CHD1O14646 AC093012.1-202ENST00000549403 582 ntBASIC-0.08□□□□□ -2.42
CHD1O14646 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.08□□□□□ -2.42
CHD1O14646 AC098483.2-201ENST00000603158 454 ntBASIC-0.08□□□□□ -2.42
CHD1O14646 RNU6-655P-201ENST00000362858 107 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 RNU6-969P-201ENST00000383900 105 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 MIR186-201ENST00000384988 86 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 ELOCP9-201ENST00000418624 239 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.09□□□□□ -2.42
CHD1O14646 RAD1P2-201ENST00000446414 663 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 AC020550.1-201ENST00000447385 163 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.09□□□□□ -2.42
CHD1O14646 AC093809.1-201ENST00000509155 340 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 AC022861.1-201ENST00000522981 663 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 BNIP3P6-201ENST00000549284 499 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 AC136618.2-201ENST00000575091 400 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 AL031281.1-201ENST00000604049 488 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 AL078595.3-201ENST00000623815 1166 ntBASIC-0.09□□□□□ -2.42
CHD1O14646 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.1□□□□□ -2.42
CHD1O14646 MTCO1P21-201ENST00000416634 589 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 MTND4P20-201ENST00000424125 869 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 MTCO3P29-201ENST00000432119 779 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 AC002486.1-201ENST00000435098 391 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.1□□□□□ -2.42
CHD1O14646 RPL39P6-201ENST00000448289 150 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 snoU13.8-201ENST00000458890 104 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 AC022022.2-201ENST00000602989 360 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 SNRPGP20-201ENST00000604477 205 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 AC091946.2-201ENST00000606105 291 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 OR5AK4P-201ENST00000635912 903 ntBASIC-0.1□□□□□ -2.42
CHD1O14646 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 MTCO2P31-201ENST00000402702 684 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.1□□□□□ -2.43
CHD1O14646 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.1□□□□□ -2.43
CHD1O14646 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.1□□□□□ -2.43
CHD1O14646 snoU13.14-201ENST00000459372 104 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.1□□□□□ -2.43
CHD1O14646 BNIP3P9-201ENST00000603714 553 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 AL161798.1-201ENST00000604630 131 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 MIR3976-201ENST00000606807 139 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 uc_338.6-201ENST00000613544 171 ntBASIC-0.1□□□□□ -2.43
CHD1O14646 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 RNA5SP214-201ENST00000363378 118 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 RNU6-438P-201ENST00000365561 103 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 MIR548B-201ENST00000385247 97 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 ARL5AP1-201ENST00000418991 388 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 AC123900.1-201ENST00000420390 96 ntBASIC-0.11□□□□□ -2.43
CHD1O14646 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms