Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 RNU6-214P-201ENST00000384130 107 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 RNY3P14-201ENST00000384309 102 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 RNU6-843P-201ENST00000384454 104 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 MIR544A-201ENST00000384855 91 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAFD1O14545 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAFD1O14545 RPL21P111-201ENST00000418453 477 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAFD1O14545 DPH3P2-201ENST00000422618 250 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AL353705.4-201ENST00000449661 238 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AC006026.2-201ENST00000457376 180 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 RNU7-187P-201ENST00000458985 68 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAFD1O14545 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAFD1O14545 AC018437.1-201ENST00000492214 406 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AC079140.5-201ENST00000507882 310 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAFD1O14545 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 SMURF2P1-201ENST00000514992 481 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 RNU6-864P-201ENST00000516256 108 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 Y_RNA.682-201ENST00000516457 100 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAFD1O14545 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 DUXAP9-208ENST00000622815 614 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AC244517.12-201ENST00000623581 663 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 MIR203B-201ENST00000636080 86 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 MIR3529-201ENST00000637713 78 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 AC241585.2-209ENST00000638217 143 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAFD1O14545 MTND5P30-201ENST00000452896 1731 ntBASIC2.17□□□□□ -2.06
TRAFD1O14545 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAFD1O14545 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
TRAFD1O14545 AL109809.4-201ENST00000603520 2185 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAFD1O14545 SNORA72.1-201ENST00000363485 129 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 Y_RNA.151-201ENST00000363566 112 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 RNU6-1317P-201ENST00000364582 104 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 RNU6-767P-201ENST00000384132 107 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TRAFD1O14545 FGF7P8-201ENST00000402994 292 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAFD1O14545 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.16□□□□□ -2.06
TRAFD1O14545 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAFD1O14545 MTND4LP16-201ENST00000440828 295 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 AC243964.1-201ENST00000441814 261 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 RNU6-329P-201ENST00000459618 107 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAFD1O14545 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 RNU7-30P-201ENST00000516835 62 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 SNORA20.3-201ENST00000516880 132 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 SCARNA3-201ENST00000517097 143 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 AC010186.2-204ENST00000537668 439 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 TRAV32-201ENST00000553993 340 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAFD1O14545 MIR5571-201ENST00000577998 113 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 MIR548S-201ENST00000581352 82 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAFD1O14545 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAFD1O14545 AL138726.1-201ENST00000614873 333 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAFD1O14545 Z75746.1-201ENST00000440243 2080 ntBASIC2.16□□□□□ -2.06
TRAFD1O14545 AL359854.1-201ENST00000614203 1594 ntBASIC2.15□□□□□ -2.06
TRAFD1O14545 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TRAFD1O14545 RNU6-212P-201ENST00000362642 104 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU6-562P-201ENST00000362731 107 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 U8.2-201ENST00000363156 134 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU6-529P-201ENST00000363383 104 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 Y_RNA.279-201ENST00000364763 95 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU6-306P-201ENST00000384617 107 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 SNORA64-201ENST00000384674 134 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU6-95P-201ENST00000384697 107 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU6-325P-201ENST00000411132 105 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAFD1O14545 MTND3P8-201ENST00000412909 339 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAFD1O14545 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAFD1O14545 MTND4LP11-201ENST00000422184 280 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 Z82205.1-201ENST00000428456 297 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 MTND3P9-201ENST00000429526 346 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAFD1O14545 AL353572.1-201ENST00000442490 417 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAFD1O14545 IFNA11P-201ENST00000446352 526 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAFD1O14545 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAFD1O14545 AC140059.1-201ENST00000489238 361 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 HMGN1P12-201ENST00000499125 195 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AC008526.1-201ENST00000509149 338 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU6-507P-201ENST00000516045 100 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 RNU5B-3P-201ENST00000516601 115 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AC109479.2-201ENST00000517842 174 ntBASIC2.15□□□□□ -2.07
TRAFD1O14545 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms