Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM38O00635 MIR4513-201ENST00000581077 86 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 AL591516.1-201ENST00000611326 274 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 uc_338.14-201ENST00000613162 166 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM38O00635 AC008264.2-201ENST00000610193 3731 ntBASIC3.16□□□□□ -1.9
TRIM38O00635 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM38O00635 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM38O00635 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM38O00635 Y_RNA.2-201ENST00000362330 96 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 Y_RNA.152-201ENST00000363578 100 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 Y_RNA.376-201ENST00000365638 108 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM38O00635 RNU6-128P-201ENST00000383976 107 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 Y_RNA.424-201ENST00000384063 103 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 MIR147B-201ENST00000390185 80 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 SNORD56-201ENST00000413522 71 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 ELOCP20-201ENST00000422460 345 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 MTND5P15-201ENST00000434246 349 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 FTH1P25-201ENST00000447665 469 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 RPL23AP45-201ENST00000476406 468 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 FO393415.2-201ENST00000480085 343 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM38O00635 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM38O00635 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AC105758.1-201ENST00000506038 399 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 RRN3P3-201ENST00000549207 578 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM38O00635 AL137100.2-201ENST00000555786 315 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM38O00635 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM38O00635 OR1M4P-201ENST00000589199 287 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AC020895.1-201ENST00000595362 272 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 Z98751.3-201ENST00000604447 521 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AC123912.5-201ENST00000605470 343 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AC096772.1-201ENST00000609146 564 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 uc_338.1-201ENST00000612113 180 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 AL161423.1-201ENST00000613700 262 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 U4.7-201ENST00000638126 106 ntBASIC3.15□□□□□ -1.91
TRIM38O00635 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM38O00635 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM38O00635 SNORD62.1-201ENST00000362541 86 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 Y_RNA.39-201ENST00000362620 98 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-37P-201ENST00000362692 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 Y_RNA.214-201ENST00000364201 112 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-11P-201ENST00000364234 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-7-201ENST00000364784 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU1-140P-201ENST00000365040 165 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-8-201ENST00000365467 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-25P-201ENST00000383873 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-1-201ENST00000383898 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-1083P-201ENST00000384022 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-48P-201ENST00000384161 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-36P-201ENST00000384172 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-4P-201ENST00000384205 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-5P-201ENST00000384238 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-3P-201ENST00000384314 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-16P-201ENST00000384385 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-15P-201ENST00000384534 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-2-201ENST00000384627 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-29P-201ENST00000384637 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-9-201ENST00000384776 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM38O00635 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM38O00635 SDAD1P3-201ENST00000427380 333 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 AL359672.1-201ENST00000442302 409 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 AC013470.1-201ENST00000453438 462 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 MTND4LP30-201ENST00000454092 297 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM38O00635 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM38O00635 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU5F-8P-201ENST00000515941 111 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 Y_RNA.673-201ENST00000516306 88 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-323P-201ENST00000521915 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM38O00635 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-85P-201ENST00000605989 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 RNU6-6P-201ENST00000606623 107 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM38O00635 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 MIR4272-201ENST00000635924 64 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 ZNF72P-201ENST00000425869 1908 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TRIM38O00635 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM38O00635 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
TRIM38O00635 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM38O00635 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM38O00635 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM38O00635 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
TRIM38O00635 Y_RNA.64-201ENST00000362845 102 ntBASIC3.13□□□□□ -1.91
TRIM38O00635 RNU6-200P-201ENST00000364743 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms