Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AP000275.1-201ENST00000411943 390 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 C1DP2-201ENST00000418167 426 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.68□□□□□ -2.3
SDCBPO00560 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.68□□□□□ -2.3
SDCBPO00560 RPL37P21-201ENST00000435890 276 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 MTCYBP39-201ENST00000437562 491 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 PRPS1P1-201ENST00000445305 876 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AC010531.2-201ENST00000465012 153 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 SNRPGP7-201ENST00000469016 106 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AC091951.3-201ENST00000504093 246 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AC010587.1-201ENST00000505809 469 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.68□□□□□ -2.3
SDCBPO00560 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 RNU6-113P-201ENST00000516653 101 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 RNU6-1220P-201ENST00000517126 108 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.68□□□□□ -2.3
SDCBPO00560 MTND5P35-201ENST00000557537 1720 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AC021231.3-201ENST00000558497 370 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.68□□□□□ -2.3
SDCBPO00560 AC109446.1-201ENST00000566172 220 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.68□□□□□ -2.3
SDCBPO00560 AC069114.2-201ENST00000604699 304 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SDCBPO00560 AC083806.3-201ENST00000614016 455 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 MIR8065-201ENST00000620577 100 ntBASIC0.68□□□□□ -2.3
SDCBPO00560 AL159152.1-201ENST00000635019 2587 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 RNY1P10-201ENST00000363268 113 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 SNORA4.2-201ENST00000365313 147 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 RNU6-142P-201ENST00000384019 107 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 MIR558-201ENST00000384920 94 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 RNU6-607P-201ENST00000411283 108 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 RNA5SP111-201ENST00000411386 101 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.67□□□□□ -2.3
SDCBPO00560 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.67□□□□□ -2.3
SDCBPO00560 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
SDCBPO00560 PGBD4P5-201ENST00000445958 426 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 MTND1P18-201ENST00000448191 573 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 ATP5J2P3-201ENST00000451550 258 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AF131216.2-201ENST00000512316 564 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 RN7SKP265-201ENST00000516448 223 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 RNU6-1098P-201ENST00000516772 96 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AC115990.1-201ENST00000526957 301 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
SDCBPO00560 MIR5697-201ENST00000578045 78 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 CTHRC1P1-201ENST00000605383 469 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AC105129.3-201ENST00000605455 485 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AL020996.3-201ENST00000606617 222 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AC027335.2-201ENST00000624030 375 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AC099654.5-201ENST00000636479 350 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 AL391516.1-201ENST00000554380 2449 ntBASIC0.67□□□□□ -2.3
SDCBPO00560 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SDCBPO00560 RNU1-124P-201ENST00000363861 145 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 Y_RNA.255-201ENST00000364581 97 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 MIR222-201ENST00000384992 110 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RNU6-1176P-201ENST00000390955 107 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 SNORD115.1-201ENST00000391109 76 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
SDCBPO00560 RNU2-39P-201ENST00000410604 198 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RNU2-7P-201ENST00000410794 178 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RNU6-293P-201ENST00000411259 106 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.66□□□□□ -2.3
SDCBPO00560 AL590135.1-201ENST00000422215 156 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RPS27AP14-201ENST00000422868 454 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC019205.3-201ENST00000424573 156 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC010975.2-201ENST00000427781 588 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 FTH1P12-201ENST00000432137 551 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.66□□□□□ -2.3
SDCBPO00560 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.66□□□□□ -2.3
SDCBPO00560 AC016700.2-201ENST00000446011 156 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 Z73417.1-201ENST00000447373 778 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AL031313.1-201ENST00000448435 256 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC132479.1-201ENST00000449160 144 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 MTATP6P14-201ENST00000455189 673 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC015911.1-201ENST00000495111 156 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC022447.4-201ENST00000504053 364 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.66□□□□□ -2.3
SDCBPO00560 UBL5P1-201ENST00000507979 193 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 SNORD116-28-201ENST00000516123 91 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 RNU6-685P-201ENST00000517088 95 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.66□□□□□ -2.3
SDCBPO00560 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.66□□□□□ -2.3
SDCBPO00560 MIR3973-201ENST00000579824 107 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 BNIP3P10-201ENST00000605360 577 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.66□□□□□ -2.3
SDCBPO00560 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.66□□□□□ -2.3
SDCBPO00560 AL031667.3-201ENST00000620124 655 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 AC019226.2-201ENST00000625973 424 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
SDCBPO00560 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SDCBPO00560 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.31
SDCBPO00560 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-37P-201ENST00000362692 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-428P-201ENST00000362942 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-11P-201ENST00000364234 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-1019P-201ENST00000364424 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-438P-201ENST00000365561 103 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-25P-201ENST00000383873 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms