Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BNIP3P16-201ENST00000589779 534 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AP000942.3-201ENST00000603702 160 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC092354.1-201ENST00000606057 376 ntBASIC1.15□□□□□ -2.23
UPK1AO00322 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.15□□□□□ -2.23
UPK1AO00322 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
UPK1AO00322 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
UPK1AO00322 Y_RNA.140-201ENST00000363474 103 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 RNU6-692P-201ENST00000384496 107 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 MIR1267-201ENST00000408723 78 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 RPL21P111-201ENST00000418453 477 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC123900.1-201ENST00000420390 96 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC010099.3-201ENST00000423896 409 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 ISCA1P6-201ENST00000427740 390 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC010975.2-201ENST00000427781 588 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.14□□□□□ -2.23
UPK1AO00322 RNU1-131P-201ENST00000458943 161 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC087477.1-201ENST00000465747 340 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC005178.1-201ENST00000508392 440 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
UPK1AO00322 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.14□□□□□ -2.23
UPK1AO00322 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.14□□□□□ -2.23
UPK1AO00322 AC008752.3-201ENST00000588113 712 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AC008945.2-201ENST00000606056 604 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 MIR98-201ENST00000606724 119 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 SEPT14P19-203ENST00000633205 211 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 AP000560.1-201ENST00000624150 1937 ntBASIC1.14□□□□□ -2.23
UPK1AO00322 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UPK1AO00322 MIR378A-201ENST00000362177 66 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 MIR454-201ENST00000390180 115 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UPK1AO00322 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.13□□□□□ -2.23
UPK1AO00322 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.13□□□□□ -2.23
UPK1AO00322 SNRPEP8-201ENST00000442866 260 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 AL162395.1-201ENST00000457882 422 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 RPL31P3-201ENST00000458430 332 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 AC097473.1-201ENST00000508142 408 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 HSPE1P4-201ENST00000550617 308 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.13□□□□□ -2.23
UPK1AO00322 HMGB1P33-201ENST00000563485 527 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 MIR3923-201ENST00000579521 83 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 MIR3908-201ENST00000579798 126 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 AC023043.2-201ENST00000589678 1026 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 AC091805.2-201ENST00000603848 235 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
UPK1AO00322 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
UPK1AO00322 RNU6-428P-201ENST00000362942 107 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 RNU6-1303P-201ENST00000364841 107 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 RNU6-336P-201ENST00000364891 107 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 RNU4-46P-201ENST00000410818 138 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 RNU6-195P-201ENST00000411352 109 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 AC139712.2-201ENST00000424302 339 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK1AO00322 AL596276.1-201ENST00000434465 418 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
UPK1AO00322 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 RPL36AP21-201ENST00000490372 323 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 AC114801.2-201ENST00000503825 781 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.12□□□□□ -2.23
UPK1AO00322 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 MTCO3P7-201ENST00000510008 774 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 SNORA31.16-201ENST00000516773 139 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 AC106038.2-201ENST00000520706 568 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 SUB1P3-201ENST00000564581 315 ntBASIC1.12□□□□□ -2.23
UPK1AO00322 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UPK1AO00322 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UPK1AO00322 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
UPK1AO00322 U3.4-201ENST00000363352 213 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 RNU6-1097P-201ENST00000363586 107 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 RNU6-112P-201ENST00000363599 104 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 RNU6-1029P-201ENST00000384109 107 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 Y_RNA.480-201ENST00000384364 102 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 MTCYBP2-201ENST00000407745 171 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 RNU2-7P-201ENST00000410794 178 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 EBAG9P1-201ENST00000418955 543 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AC078809.1-201ENST00000427601 140 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK1AO00322 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK1AO00322 MTCO1P44-201ENST00000441935 243 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 PRPS1P1-201ENST00000445305 876 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AL031274.1-201ENST00000450334 232 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 MTCYBP1-201ENST00000454315 1119 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 RNA5SP269-201ENST00000459032 137 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AC079140.5-201ENST00000507882 310 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 RNU5F-4P-201ENST00000516581 114 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.11□□□□□ -2.23
UPK1AO00322 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.11□□□□□ -2.23
UPK1AO00322 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK1AO00322 MIR4769-201ENST00000584126 77 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AC012507.3-201ENST00000603556 477 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 AC011458.1-201ENST00000604034 617 ntBASIC1.11□□□□□ -2.23
UPK1AO00322 Z84480.1-201ENST00000605131 311 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms