Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC009163.5-201ENST00000575421 637 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 MIR3128-201ENST00000581957 66 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 uc_338.25-201ENST00000613756 156 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AC090617.7-201ENST00000623952 126 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 MIR4272-201ENST00000635924 64 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 AP003122.5-201ENST00000527668 3766 ntBASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC187A0A096LP49 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.214-201ENST00000364201 112 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 RNU6-596P-201ENST00000365395 98 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AP002088.1-201ENST00000382740 395 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.483-201ENST00000384380 101 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AC099799.1-201ENST00000439809 192 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AC010401.1-201ENST00000463867 348 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 MED28P2-201ENST00000475771 317 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 RNU6-1023P-201ENST00000516137 106 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 RNU6-612P-201ENST00000516909 102 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AC025281.1-201ENST00000567026 265 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 U2.22-201ENST00000636441 106 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 MIR3529-201ENST00000637713 78 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AC010615.1-201ENST00000594254 1764 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC187A0A096LP49 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC092435.3-201ENST00000565538 3654 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 HAUS6P2-201ENST00000433254 2404 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.2-201ENST00000362330 96 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.14-201ENST00000362415 103 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 U8.8-201ENST00000365399 135 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.461-201ENST00000384263 103 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 RNU6-750P-201ENST00000390946 107 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 RNU2-38P-201ENST00000410856 79 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC074117.2-201ENST00000417130 397 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 ELOCP20-201ENST00000422460 345 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC022018.1-201ENST00000430685 241 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC133134.1-201ENST00000466800 359 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 RN7SKP272-201ENST00000516988 232 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 SNORA31.18-201ENST00000517043 134 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3□□□□□ -1.93
CCDC187A0A096LP49 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC109446.1-201ENST00000566172 220 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 MIR5188-201ENST00000583467 113 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC005899.2-201ENST00000584353 90 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC091152.3-201ENST00000604227 325 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 MIR3976-201ENST00000606807 139 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3□□□□□ -1.93
CCDC187A0A096LP49 MIR8076-201ENST00000611401 83 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 AC137590.2-201ENST00000619709 240 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3□□□□□ -1.93
CCDC187A0A096LP49 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
CCDC187A0A096LP49 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC187A0A096LP49 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AL157777.2-201ENST00000258070 137 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 MIR30E-201ENST00000362104 92 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.39-201ENST00000362620 98 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RNU1-35P-201ENST00000362782 153 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.152-201ENST00000363578 100 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RNU6-806P-201ENST00000365147 105 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.376-201ENST00000365638 108 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RNU6-19P-201ENST00000384718 107 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 MIR521-1-201ENST00000384902 87 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RN7SKP220-201ENST00000410611 288 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RNU6-1245P-201ENST00000411130 106 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC009969.1-201ENST00000438726 172 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC012308.1-201ENST00000451232 178 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 FO393415.2-201ENST00000480085 343 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC022447.4-201ENST00000504053 364 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC105758.1-201ENST00000506038 399 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RNU5F-8P-201ENST00000515941 111 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 SNORA40.14-201ENST00000516543 86 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RNU6-307P-201ENST00000516743 106 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 MIR4672-201ENST00000583126 81 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC078899.3-201ENST00000599065 212 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms