Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 SNRPEP3-201ENST00000338402 276 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 SNORD114-5-201ENST00000362928 70 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 RNU6-700P-201ENST00000391043 107 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 RN7SKP266-201ENST00000410232 287 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 MTCO1P21-201ENST00000416634 589 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC013262.1-201ENST00000426710 252 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 RPF2P2-201ENST00000504693 896 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC016256.1-201ENST00000547971 354 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 RPL23AP91-201ENST00000569211 455 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC007363.1-201ENST00000604736 620 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC104408.1-201ENST00000605241 170 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 MIR8087-201ENST00000612745 78 ntBASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.27□□□□□ -2.45
TRAV30A0A087WSZ9 AC121333.1-201ENST00000567488 2709 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 RNU6-793P-201ENST00000384233 104 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 SNORD41-201ENST00000386967 70 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 BX119904.4-201ENST00000424402 301 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 COX7BP2-201ENST00000437976 242 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 SNRPEP8-201ENST00000442866 260 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 MTCO3P28-201ENST00000513351 515 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 SNORA31.19-201ENST00000517079 126 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 AC091163.3-201ENST00000518269 1144 ntBASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
TRAV30A0A087WSZ9 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AL358176.2-201ENST00000425769 204 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 snoU13.25-201ENST00000458945 104 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AC106038.2-201ENST00000520706 568 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AC025678.1-201ENST00000567861 338 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 SNORA59B-202ENST00000578183 701 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AC010620.1-201ENST00000601088 1102 ntBASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV30A0A087WSZ9 AC073544.1-201ENST00000600110 1595 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6-97P-201ENST00000363387 104 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RNU4-48P-201ENST00000365559 182 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6-505P-201ENST00000384427 107 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6-114P-201ENST00000384704 105 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RNA5SP496-201ENST00000391240 109 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC068533.2-201ENST00000411872 306 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 MTCO2P1-201ENST00000424648 477 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 RPL23AP50-201ENST00000434149 455 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AL606517.1-201ENST00000446914 387 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC092436.3-201ENST00000511788 257 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC022523.2-201ENST00000561045 150 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 TPRKBP2-201ENST00000565969 475 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 MIR3136-201ENST00000583498 78 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC243773.3-201ENST00000613270 256 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 AL390237.1-201ENST00000404226 1415 ntBASIC-0.3□□□□□ -2.46
TRAV30A0A087WSZ9 MTND4P21-201ENST00000453886 1357 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 MTCO3P41-201ENST00000414801 328 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AC073261.1-201ENST00000429409 121 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 MTCO3P10-201ENST00000455912 772 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AC091860.1-201ENST00000505723 432 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 SNORA70.12-201ENST00000516084 153 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6-143P-201ENST00000516942 93 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 SNRPGP1-201ENST00000553864 222 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AC133794.1-201ENST00000602731 914 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AL353149.1-201ENST00000610667 244 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 AC106754.2-201ENST00000623006 233 ntBASIC-0.31□□□□□ -2.46
TRAV30A0A087WSZ9 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms