Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL359999.1-201ENST00000604513 294 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC090578.1-201ENST00000604955 591 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AL031775.1-201ENST00000607014 887 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 AC019226.2-201ENST00000625973 424 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 SNORD98-201ENST00000636377 67 ntBASIC1.09□□□□□ -2.23
USH1CQ9Y6N9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
USH1CQ9Y6N9 MIR302D-201ENST00000362275 68 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 RNU4-91P-201ENST00000364778 135 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 RNU6-61P-201ENST00000365528 109 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AL022238.1-201ENST00000442557 355 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 RPL9P9-202ENST00000466501 579 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC079140.2-201ENST00000506193 142 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC104806.1-201ENST00000508720 308 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 Y_RNA.673-201ENST00000516306 88 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC019176.1-201ENST00000518519 225 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 MTND4P33-201ENST00000556706 766 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC091489.2-201ENST00000566263 604 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC098848.2-201ENST00000588023 330 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC073539.2-201ENST00000597113 165 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC110760.3-201ENST00000598794 467 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AP000811.1-201ENST00000603803 651 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 AC104010.1-201ENST00000616889 150 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 U4.7-201ENST00000638126 106 ntBASIC1.08□□□□□ -2.24
USH1CQ9Y6N9 RNU6-438P-201ENST00000365561 103 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 MIR520A-201ENST00000384862 85 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 RNU2-7P-201ENST00000410794 178 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 EBAG9P1-201ENST00000418955 543 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AL009048.1-201ENST00000450437 298 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AC022447.4-201ENST00000504053 364 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 RNU5A-4P-201ENST00000516588 111 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 MIR3937-201ENST00000580135 106 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AC018714.1-201ENST00000605028 208 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 AL078604.3-201ENST00000615580 211 ntBASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.07□□□□□ -2.24
USH1CQ9Y6N9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AL391994.1-201ENST00000254724 282 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 MIR340-201ENST00000362125 95 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 RNU5F-6P-201ENST00000362979 116 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 RNU6-105P-201ENST00000363909 104 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 RNU6-142P-201ENST00000384019 107 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 RNU2-3P-201ENST00000410144 191 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 RPS6P15-201ENST00000431996 751 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 FTH1P12-201ENST00000432137 551 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 SNORA3.4-201ENST00000515969 96 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AC109446.1-201ENST00000566172 220 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 MIR4999-201ENST00000585029 91 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 Z69720.2-201ENST00000624755 279 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AP000720.1-201ENST00000625091 483 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 AC095038.3-201ENST00000634439 195 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 MTND4P9-201ENST00000507819 1346 ntBASIC1.06□□□□□ -2.24
USH1CQ9Y6N9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 Y_RNA.22-201ENST00000362492 102 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 RNU6-179P-201ENST00000363350 107 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 MIR620-201ENST00000385232 95 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 Y_RNA.608-201ENST00000410647 95 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 RNU6-607P-201ENST00000411283 108 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 CYCSP33-201ENST00000414485 327 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 C8orf59P1-201ENST00000429930 303 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 MTCYBP39-201ENST00000437562 491 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AC027119.1-201ENST00000440877 241 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 MTND1P30-201ENST00000441241 901 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AC243964.1-201ENST00000441814 261 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 SNRPGP9-201ENST00000456025 225 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 RPL30P7-201ENST00000479312 323 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 HMGN1P7-201ENST00000491722 313 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 UBE2V1P12-201ENST00000503954 474 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AC108078.1-201ENST00000508073 725 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 ATP5EP1-201ENST00000510257 156 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 RNU6-685P-201ENST00000517088 95 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 AC012414.6-201ENST00000568241 401 ntBASIC1.05□□□□□ -2.24
USH1CQ9Y6N9 MIR3136-201ENST00000583498 78 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms