Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 Y_RNA.570-201ENST00000384750 101 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-159P-201ENST00000391080 106 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP104-201ENST00000410989 118 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC004552.1-201ENST00000419089 348 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC007969.2-201ENST00000441891 191 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RPL37P4-201ENST00000448908 268 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RPS26P3-201ENST00000470205 348 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC117440.1-201ENST00000474107 571 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC090543.2-201ENST00000483963 348 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC004057.1-201ENST00000485827 348 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC078918.1-201ENST00000498515 228 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-861P-201ENST00000516745 106 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AL138963.2-201ENST00000605137 226 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 SNORA43.4-201ENST00000629559 138 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 Z83843.1-201ENST00000604070 3685 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 SNORA25.1-201ENST00000362326 128 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.286-201ENST00000364813 102 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.319-201ENST00000365138 92 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 SNORD50.2-201ENST00000365465 70 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RNU1-73P-201ENST00000383971 164 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.435-201ENST00000384095 112 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-21P-201ENST00000384710 107 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 U3.39-201ENST00000408569 239 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RN7SKP61-201ENST00000410642 295 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP39-201ENST00000411245 120 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RPL19P1-201ENST00000411635 428 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AL512844.2-201ENST00000433990 593 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AC007395.1-201ENST00000451333 677 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 H3F3AP1-201ENST00000559984 334 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AC005296.1-201ENST00000616145 209 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 AL590240.4-201ENST00000616908 390 ntBASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCFC2Q9Y5Z7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 MIR410-201ENST00000362222 80 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNA5SP361-201ENST00000362686 118 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1159P-201ENST00000362933 107 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 SNORD74.4-201ENST00000364129 80 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-898P-201ENST00000365627 104 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-926P-201ENST00000384075 107 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-658P-201ENST00000384606 106 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-541P-201ENST00000384709 110 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 MIR329-1-201ENST00000385028 80 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 SNORA46.1-201ENST00000391069 153 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 MIR888-201ENST00000401186 77 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AL357075.1-201ENST00000404107 726 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU2-61P-201ENST00000411069 191 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC074117.2-201ENST00000417130 397 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AL358075.3-201ENST00000426289 226 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AL356535.1-201ENST00000440335 398 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 SNORD2.1-201ENST00000458762 69 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 S100A11P2-201ENST00000467589 312 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RN7SL594P-201ENST00000470590 287 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC025445.1-201ENST00000502728 300 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC091874.1-201ENST00000511402 339 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-567P-201ENST00000516746 107 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
HCFC2Q9Y5Z7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms