Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 HSPE1P4-201ENST00000550617 308 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AC104581.2-201ENST00000572227 430 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 MIR4680-201ENST00000580906 66 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AL162713.1-201ENST00000604480 262 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AC022149.2-201ENST00000621061 203 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 AL606534.2-204ENST00000635008 178 ntBASIC3.34□□□□□ -1.87
PCDHGA2Q9Y5H1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
PCDHGA2Q9Y5H1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA2Q9Y5H1 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.88
PCDHGA2Q9Y5H1 AC005592.1-201ENST00000566527 1640 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC233981.2-201ENST00000611524 1614 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU6-1286P-201ENST00000383871 107 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RNA5SP494-201ENST00000410653 129 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC017079.2-201ENST00000416102 485 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 OOSP1P1-201ENST00000423265 274 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AP001324.2-201ENST00000461163 319 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RPL31P41-201ENST00000477967 372 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC015911.1-201ENST00000495111 156 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU6-567P-201ENST00000516746 107 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC021231.3-201ENST00000558497 370 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 MIR3136-201ENST00000583498 78 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC008737.2-201ENST00000599446 118 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AL138825.1-201ENST00000618587 192 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA2Q9Y5H1 FAM35CP-201ENST00000554755 2470 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU4-9P-201ENST00000364951 139 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 SNORA12.2-201ENST00000391040 156 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU6-985P-201ENST00000410182 104 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 RPL30P12-201ENST00000474666 353 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC091874.1-201ENST00000511402 339 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 RNA5SP112-201ENST00000515937 99 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC144568.1-201ENST00000520139 137 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 MRPS36P4-201ENST00000534436 298 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC136443.5-201ENST00000603741 370 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 SCARNA4-201ENST00000629045 128 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA2Q9Y5H1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU6-1285P-201ENST00000363480 105 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU4-42P-201ENST00000364738 142 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AL358453.1-201ENST00000422522 250 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 GPM6BP3-201ENST00000442797 145 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 snoU13.14-201ENST00000459372 104 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 RPL23AP75-201ENST00000491601 451 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU7-175P-201ENST00000515915 61 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 Y_RNA.720-201ENST00000517166 92 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 MIR4765-201ENST00000585007 77 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 SNORD58B-201ENST00000607313 66 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC087588.2-201ENST00000617667 426 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC138305.3-201ENST00000624988 240 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 SNORA43.4-201ENST00000629559 138 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 MIR4272-201ENST00000635924 64 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 AC010329.5-201ENST00000623497 2174 ntBASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA2Q9Y5H1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA2Q9Y5H1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA2Q9Y5H1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA2Q9Y5H1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA2Q9Y5H1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA2Q9Y5H1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA2Q9Y5H1 OR56A5-201ENST00000340110 738 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms