Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC096644.2-201ENST00000429278 159 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 U8.20-201ENST00000459445 131 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RPS27P26-201ENST00000494583 239 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC015911.1-201ENST00000495111 156 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC110794.1-201ENST00000505816 425 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RNU4-77P-201ENST00000516692 156 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC115990.1-201ENST00000526957 301 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 HSPE1P4-201ENST00000550617 308 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC104581.2-201ENST00000572227 430 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AC113195.1-201ENST00000579952 141 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 MIR3124-201ENST00000582636 67 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 AP000560.1-201ENST00000624150 1937 ntBASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHB1Q9Y5F3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC092268.1-201ENST00000342691 405 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 MIR422A-201ENST00000362286 90 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-238P-201ENST00000363313 106 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.452-201ENST00000384202 108 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RNU2-23P-201ENST00000410545 195 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC138623.1-201ENST00000418060 216 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC004383.1-201ENST00000438135 289 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC025750.2-201ENST00000442609 450 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AL353752.1-201ENST00000454946 260 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-475P-201ENST00000516073 104 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC109329.1-201ENST00000518744 317 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC104027.1-201ENST00000521887 300 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RPS15AP11-201ENST00000594193 385 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC137590.2-201ENST00000619709 240 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 ZNF826P-207ENST00000622273 1910 ntBASIC3.23□□□□□ -1.89
PCDHB1Q9Y5F3 AC005592.1-201ENST00000566527 1640 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 SNORD114-19-201ENST00000363072 75 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 Y_RNA.455-201ENST00000384230 98 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-907P-201ENST00000390924 102 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AL358075.3-201ENST00000426289 226 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC244670.1-201ENST00000436879 112 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AL353705.4-201ENST00000449661 238 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 SNRPGP7-201ENST00000469016 106 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 RPL30P12-201ENST00000474666 353 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 RNU6-635P-201ENST00000516651 102 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC091144.1-201ENST00000519573 138 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC110588.1-201ENST00000559699 137 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AC100812.1-201ENST00000607622 580 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 AL606534.2-204ENST00000635008 178 ntBASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHB1Q9Y5F3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.21□□□□□ -1.89
PCDHB1Q9Y5F3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.149-201ENST00000363558 117 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA12.2-201ENST00000391040 156 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 RNA5SP494-201ENST00000410653 129 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 CYCSP48-201ENST00000417124 323 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC114482.1-201ENST00000418010 247 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 DPH3P2-201ENST00000422618 250 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC092423.1-201ENST00000430165 186 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 RPL21P2-201ENST00000440049 481 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 GPM6BP3-201ENST00000442797 145 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 snoU13.30-201ENST00000458951 104 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC010655.3-201ENST00000478818 450 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 RPL23AP75-201ENST00000491601 451 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms