Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC007256.1-201ENST00000392253 2765 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 Z75746.1-201ENST00000440243 2080 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.582-201ENST00000391023 95 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 CIR1P3-201ENST00000405137 479 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 RNU2-36P-201ENST00000410361 191 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 RNU2-23P-201ENST00000410545 195 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 POLHP1-201ENST00000411806 470 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 MTCO3P41-201ENST00000414801 328 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC010975.2-201ENST00000427781 588 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.4□□□□□ -2.19
SHANK1Q9Y566 CECR9-201ENST00000453421 199 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 RNU7-66P-201ENST00000459469 62 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC011005.2-201ENST00000487324 359 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC018437.1-201ENST00000492214 406 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 MTCYBP40-201ENST00000509390 1135 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC245505.1-201ENST00000556398 224 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 SUB1P2-201ENST00000556401 297 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 MIR4424-201ENST00000585257 86 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 AC245884.12-201ENST00000615364 59 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.4□□□□□ -2.19
SHANK1Q9Y566 MIR3199-2-201ENST00000636243 86 ntBASIC1.4□□□□□ -2.19
SHANK1Q9Y566 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 OR4G2P-201ENST00000328113 903 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.231-201ENST00000364358 102 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.399-201ENST00000383955 105 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 SNORA24.1-201ENST00000384401 135 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.559-201ENST00000384686 107 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 MIR181A1-201ENST00000385026 110 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AL513475.1-201ENST00000406602 315 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 RNU4-55P-201ENST00000410731 137 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 RNU6-293P-201ENST00000411259 106 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 PGBD4P6-201ENST00000421501 610 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 MTCYBP8-201ENST00000422855 651 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 BX510359.4-201ENST00000423750 193 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 SKA2P1-201ENST00000425592 390 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 DLGAP5P1-201ENST00000430307 464 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AC000111.3-201ENST00000433478 193 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 SEPT14P3-201ENST00000439401 183 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AL732372.2-207ENST00000445840 183 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 SEPT14P2-201ENST00000453405 183 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AL583843.1-201ENST00000456070 346 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AL441985.1-201ENST00000457727 251 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 RNU7-138P-201ENST00000459479 64 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 RPS15AP34-201ENST00000487776 387 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 SEPT14P4-201ENST00000513445 186 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 SNORA14.1-201ENST00000516113 141 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 FO082796.1-201ENST00000523795 183 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AL512360.1-201ENST00000555346 234 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AC021231.3-201ENST00000558497 370 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.39□□□□□ -2.19
SHANK1Q9Y566 MIR4285-201ENST00000581001 85 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AC005730.3-201ENST00000583067 366 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 AC026585.1-201ENST00000619582 524 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 MIR1321-201ENST00000637766 79 ntBASIC1.39□□□□□ -2.19
SHANK1Q9Y566 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 RNU6-1287P-201ENST00000362914 107 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 SNORA6-201ENST00000384033 151 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 RNU6-1060P-201ENST00000384664 107 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 RNU6-750P-201ENST00000390946 107 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 C1DP4-201ENST00000455429 424 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC083798.1-201ENST00000472671 131 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 SNORA31.6-201ENST00000516241 130 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC087854.1-201ENST00000519706 414 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AL137161.1-201ENST00000532231 390 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC103996.1-201ENST00000555468 102 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 MIR548AC-201ENST00000585049 88 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AL021997.1-201ENST00000605757 193 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC103591.3-201ENST00000608684 209 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 U4.7-201ENST00000638126 106 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC138393.1-203ENST00000327086 343 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 SNORD70.1-201ENST00000391007 85 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 RNU6-780P-201ENST00000391030 104 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 AC013470.1-201ENST00000453438 462 ntBASIC1.38□□□□□ -2.19
SHANK1Q9Y566 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms