Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AC133104.1-201ENST00000429100 218 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AC013470.1-201ENST00000453438 462 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNA5SP269-201ENST00000459032 137 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRC42Q9Y546 MTCO3P7-201ENST00000510008 774 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNU6-377P-201ENST00000515965 102 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RNU2-69P-201ENST00000516061 100 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 COPS8P3-201ENST00000526024 482 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AP001893.2-201ENST00000526949 202 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 LRRC34P1-201ENST00000542742 915 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AC103987.3-201ENST00000582071 292 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 BNIP3P16-201ENST00000589779 534 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AL590229.1-201ENST00000603497 542 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 AL022345.1-201ENST00000607292 135 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 SNORD98-201ENST00000636377 67 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.3□□□□□ -2.2
LRRC42Q9Y546 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 RNU6-43P-201ENST00000384302 107 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 RNU6-1127P-201ENST00000384580 107 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 SNORA48.1-201ENST00000390879 135 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 SNORA16.2-201ENST00000390991 127 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 RNU2-41P-201ENST00000410991 178 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 RNU6-1245P-201ENST00000411130 106 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 RNU6-293P-201ENST00000411259 106 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 BX295541.1-201ENST00000417774 250 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AL117339.3-201ENST00000418733 162 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 RPL31P58-201ENST00000469001 379 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC145146.1-201ENST00000496370 254 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC022447.4-201ENST00000504053 364 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 MTND3P5-201ENST00000512798 333 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 MIR449C-201ENST00000516047 92 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC109479.2-201ENST00000517842 174 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 TRAV32-201ENST00000553993 340 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 MIR3169-201ENST00000578032 83 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC011494.1-201ENST00000596454 237 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 Z94722.1-201ENST00000604328 474 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC008993.2-201ENST00000631744 806 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 AC241585.2-209ENST00000638217 143 ntBASIC1.29□□□□□ -2.2
LRRC42Q9Y546 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 Y_RNA.169-201ENST00000363745 96 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 RNU6-393P-201ENST00000384475 107 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 RNU6-456P-201ENST00000384493 107 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 SNORD70.1-201ENST00000391007 85 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL031667.1-201ENST00000440222 725 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 PRPS1P1-201ENST00000445305 876 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL035666.1-201ENST00000446195 348 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 SNORA59A-201ENST00000459326 152 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 RNVU1-2-201ENST00000516326 135 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 SNORA31.16-201ENST00000516773 139 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 Y_RNA.717-201ENST00000517106 92 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 SNORA25.17-201ENST00000517184 124 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 SUB1P3-201ENST00000564581 315 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AP000654.2-201ENST00000605633 586 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AP001596.2-201ENST00000608410 312 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRC42Q9Y546 MIR6845-201ENST00000613182 61 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AL590240.4-201ENST00000616908 390 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 uc_338.11-201ENST00000619132 160 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 AP000560.1-201ENST00000624150 1937 ntBASIC1.28□□□□□ -2.2
LRRC42Q9Y546 RNU6-181P-201ENST00000363225 107 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNU6-23P-201ENST00000363283 107 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 U3.4-201ENST00000363352 213 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 Y_RNA.201-201ENST00000364052 96 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNA5SP493-201ENST00000364115 91 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNU6-1141P-201ENST00000364520 107 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 SNORD32A-201ENST00000364805 84 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNU6-160P-201ENST00000384591 107 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNU6-606P-201ENST00000384721 111 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AL627390.1-201ENST00000396055 340 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RPS29P13-201ENST00000402041 169 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AL357139.1-201ENST00000407792 426 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 MIR1323-201ENST00000408090 73 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNA5SP100-201ENST00000410903 110 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms