Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AP001836.1-201ENST00000604675 523 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 AL450472.1-202ENST00000637286 180 ntBASIC1.53□□□□□ -2.16
KCNIP3Q9Y2W7 RPL17P50-201ENST00000396131 546 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AL135786.1-201ENST00000415892 214 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC090960.1-201ENST00000421072 306 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 FTH1P25-201ENST00000447665 469 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 HMGN2P18-201ENST00000450680 270 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC087884.1-201ENST00000469738 328 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 HMGB1P29-201ENST00000505659 499 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC005741.1-201ENST00000511094 432 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 GNAI2P1-201ENST00000541815 315 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 EIF4BP1-201ENST00000554881 351 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 MIR3923-201ENST00000579521 83 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC078795.3-201ENST00000602913 472 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 uc_338.34-201ENST00000617467 174 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC130454.1-201ENST00000622948 401 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 AC243829.7-201ENST00000633081 225 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 MIR3974-201ENST00000637126 96 ntBASIC1.52□□□□□ -2.17
KCNIP3Q9Y2W7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 LINC02555-201ENST00000563933 1951 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 SNORD114-6-201ENST00000364393 72 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 RNU6-1158P-201ENST00000391167 107 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 MTCO2P18-201ENST00000457151 658 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 RNU1-131P-201ENST00000458943 161 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 AL163973.1-201ENST00000484753 577 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 CCDC34P1-201ENST00000507441 517 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 MIR4424-201ENST00000585257 86 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 AC004223.2-201ENST00000590309 544 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 RNU6-85P-201ENST00000605989 107 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 AC025754.2-201ENST00000606491 432 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 HULC.1-201ENST00000612720 240 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.51□□□□□ -2.17
KCNIP3Q9Y2W7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 Y_RNA.77-201ENST00000362962 107 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 Y_RNA.553-201ENST00000384670 102 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 RN7SKP32-201ENST00000410167 303 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AP000275.1-201ENST00000411943 390 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AL353193.1-201ENST00000421444 268 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC006946.1-201ENST00000429106 328 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC002486.1-201ENST00000435098 391 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 MTND1P26-201ENST00000440488 538 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 RNA5SP57-201ENST00000459463 123 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC007547.1-201ENST00000462177 490 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC108078.1-201ENST00000508073 725 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC091874.1-201ENST00000511402 339 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 RN7SKP298-201ENST00000515950 94 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 RNVU1-2-201ENST00000516326 135 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 MTND4P7-201ENST00000523876 130 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 MTND3P12-201ENST00000559068 328 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 PCGEM1.1-201ENST00000613431 131 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AC009509.4-201ENST00000619202 509 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 SNORA43.4-201ENST00000629559 138 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 ELL2P3-201ENST00000457883 1602 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 AL136360.1-201ENST00000503377 1900 ntBASIC1.5□□□□□ -2.17
KCNIP3Q9Y2W7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AL356292.1-201ENST00000283110 373 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 U3.9-201ENST00000363823 204 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 Y_RNA.255-201ENST00000364581 97 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC019129.1-201ENST00000403786 261 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AL023284.1-201ENST00000403956 276 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC123900.1-201ENST00000420390 96 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 MTCO2P3-201ENST00000442543 421 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 MTCO1P19-201ENST00000443487 500 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 RNU7-138P-201ENST00000459479 64 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC008628.2-201ENST00000502605 298 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 ATP5EP1-201ENST00000510257 156 ntBASIC1.49□□□□□ -2.17
KCNIP3Q9Y2W7 AC091133.4-201ENST00000511142 308 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms