Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AC018889.1-201ENST00000605372 397 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC084824.5-201ENST00000612009 413 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 7SK.8-201ENST00000612110 250 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 7SK.11-201ENST00000615477 250 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 MIR8063-201ENST00000621930 81 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 7SK.13-201ENST00000622040 250 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 OR4G2P-201ENST00000328113 903 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 Y_RNA.30-201ENST00000362572 97 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 RPL23AP32-201ENST00000395315 459 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 FCF1P10-201ENST00000407590 479 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC006366.1-201ENST00000422002 759 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 BTBD7P2-201ENST00000441962 620 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 SCARNA16.2-201ENST00000516520 172 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AL356057.1-201ENST00000533798 831 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 MIR924-201ENST00000638017 53 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC006927.4-201ENST00000639187 543 ntBASIC0.61□□□□□ -2.31
SCN8AQ9UQD0 AC092104.1-201ENST00000497346 1441 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 RNU5E-7P-201ENST00000365290 117 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 RNU6-439P-201ENST00000384188 106 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 SNORA40.2-201ENST00000390847 128 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 RPL23AP30-201ENST00000432419 501 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 RNU6-1092P-201ENST00000516955 87 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AC019288.1-201ENST00000557918 224 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AC068620.3-201ENST00000602749 560 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AL022345.2-201ENST00000606307 135 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 AC103706.2-201ENST00000638080 240 ntBASIC0.6□□□□□ -2.31
SCN8AQ9UQD0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 RNU4-56P-201ENST00000364700 142 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 RNU6-16P-201ENST00000384385 107 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 ELOCP17-201ENST00000414751 326 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 ELOCP9-201ENST00000418624 239 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 USP9YP11-201ENST00000427537 717 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AL008629.1-201ENST00000438615 184 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AC119751.4-201ENST00000507498 357 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 SNORA31.4-201ENST00000516049 129 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 Y_RNA.687-201ENST00000516558 91 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 SUMO2P18-201ENST00000518873 252 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AL442163.3-201ENST00000554110 156 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 AL512427.1-201ENST00000618593 349 ntBASIC0.59□□□□□ -2.31
SCN8AQ9UQD0 RNU6-743P-201ENST00000364151 106 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 SNORA63D-201ENST00000364359 132 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 RNU6-142P-201ENST00000384019 107 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 Y_RNA.472-201ENST00000384322 102 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 AC099677.2-201ENST00000436385 175 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 AC007327.1-201ENST00000447461 264 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 AL133373.1-201ENST00000497098 94 ntBASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SCN8AQ9UQD0 RNU6-462P-201ENST00000362659 105 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 SNORD116-12-201ENST00000384468 92 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 PIGPP2-201ENST00000411569 458 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 VPS26BP1-201ENST00000417155 755 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 OR2AQ1P-201ENST00000451972 200 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 snoU109.2-201ENST00000459316 135 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 RNU6-165P-201ENST00000517170 99 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 MIR4653-201ENST00000585107 83 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AC091135.1-201ENST00000585943 307 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AC078795.2-201ENST00000602835 1252 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 RNU6-1192P-201ENST00000612197 107 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 RNU6-489P-201ENST00000618289 107 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 AC068205.3-201ENST00000636385 468 ntBASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SCN8AQ9UQD0 RNU6-296P-201ENST00000384608 107 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 USP9YP33-201ENST00000412220 421 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC010587.2-201ENST00000511727 448 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 AC025678.1-201ENST00000567861 338 ntBASIC0.57□□□□□ -2.32
SCN8AQ9UQD0 MTCYBP33-201ENST00000575007 1130 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms