Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 SNORA43.4-201ENST00000629559 138 ntBASIC4.3□□□□□ -1.72
SPG7Q9UQ90 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.3□□□□□ -1.72
SPG7Q9UQ90 AF127577.6-201ENST00000623352 2191 ntBASIC4.3□□□□□ -1.72
SPG7Q9UQ90 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPG7Q9UQ90 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC017071.1-201ENST00000564407 2204 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 RNU6-843P-201ENST00000384454 104 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 MIR153-2-201ENST00000385225 87 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC126124.2-201ENST00000413542 321 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AL590664.1-201ENST00000448065 339 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 MTND1P19-201ENST00000511780 315 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 Y_RNA.713-201ENST00000517013 96 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC007375.1-201ENST00000554513 578 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AL356157.2-201ENST00000605122 111 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC011373.1-201ENST00000607270 237 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC002076.2-201ENST00000617362 122 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 MIR6076-201ENST00000617521 113 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 SDR42E1P4-201ENST00000620894 481 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 MIR6852-201ENST00000621699 66 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC006386.2-201ENST00000624491 75 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 AC012005.1-201ENST00000624575 75 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 MIR3199-2-201ENST00000636243 86 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 ZNF826P-207ENST00000622273 1910 ntBASIC4.29□□□□□ -1.72
SPG7Q9UQ90 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPG7Q9UQ90 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 AP001486.2-201ENST00000561652 5113 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 RNU1-70P-201ENST00000362618 164 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 RNU6-1301P-201ENST00000362724 104 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 Y_RNA.510-201ENST00000384511 114 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 SNORD78.2-201ENST00000391076 69 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 RNU2-25P-201ENST00000411041 191 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 BX679664.1-201ENST00000434429 253 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 GPM6BP3-201ENST00000442797 145 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 CEACAMP4-201ENST00000457676 421 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 AP000870.1-201ENST00000472927 406 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 ACA59.2-201ENST00000517061 156 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 MIR376A1-201ENST00000616574 68 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 MIR3529-201ENST00000637713 78 ntBASIC4.28□□□□□ -1.72
SPG7Q9UQ90 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.28□□□□□ -1.72
SPG7Q9UQ90 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.27□□□□□ -1.73
SPG7Q9UQ90 Y_RNA.143-201ENST00000363520 106 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 RNU6-879P-201ENST00000364328 108 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 SNORA20.1-201ENST00000364790 130 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 Y_RNA.562-201ENST00000384695 113 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 MIR215-201ENST00000384858 110 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 SSXP4-201ENST00000451349 245 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.27□□□□□ -1.73
SPG7Q9UQ90 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.27□□□□□ -1.73
SPG7Q9UQ90 AC136932.1-201ENST00000574771 208 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 Y_RNA.772-201ENST00000606692 102 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 AC011476.5-201ENST00000615594 130 ntBASIC4.27□□□□□ -1.73
SPG7Q9UQ90 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.27□□□□□ -1.73
SPG7Q9UQ90 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPG7Q9UQ90 Y_RNA.84-201ENST00000363011 104 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU5B-2P-201ENST00000363036 113 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 SNORA80A-201ENST00000363922 136 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU6-1141P-201ENST00000364520 107 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU6-1026P-201ENST00000384465 108 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU6-1093P-201ENST00000391194 107 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AL079342.1-201ENST00000401460 267 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 MTND4LP30-201ENST00000454092 297 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RPS4XP22-201ENST00000480755 780 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AP001025.1-201ENST00000486139 332 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 HMGB1P35-201ENST00000503360 598 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC016632.1-201ENST00000503994 196 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU5F-8P-201ENST00000515941 111 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU6-1023P-201ENST00000516137 106 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 Y_RNA.673-201ENST00000516306 88 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 RNU6-1012P-201ENST00000516606 109 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC107934.2-201ENST00000518653 310 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC022080.3-201ENST00000544433 482 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC023824.2-201ENST00000566185 400 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 MIR2682-201ENST00000580305 110 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 MIR4300-201ENST00000581016 96 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC012433.1-201ENST00000588916 398 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC093732.2-201ENST00000607950 274 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 uc_338.1-201ENST00000612113 180 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 AC240442.1-201ENST00000616055 283 ntBASIC4.26□□□□□ -1.73
SPG7Q9UQ90 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SPG7Q9UQ90 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPG7Q9UQ90 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SPG7Q9UQ90 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms