Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR4719-201ENST00000585233 84 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 AC009314.1-201ENST00000603871 304 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 PISRT1.1-201ENST00000616930 107 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 AC126177.8-201ENST00000618339 1015 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 U4.3-201ENST00000621047 82 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 ZNF658B-202ENST00000615961 3375 ntBASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDK11AQ9UQ88 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 RPL9P7-201ENST00000330965 580 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 RNU6-527P-201ENST00000363425 104 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 Y_RNA.259-201ENST00000364619 101 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 RNU6-790P-201ENST00000384479 105 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 MIR181A2-201ENST00000384863 110 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 MTCYBP4-201ENST00000401524 249 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 RNU6-370P-201ENST00000411008 104 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 SNORD19B-201ENST00000459623 84 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 RPL9P9-202ENST00000466501 579 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 AC103975.1-201ENST00000482506 483 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 MTCYBP40-201ENST00000509390 1135 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 RNU6-581P-201ENST00000516214 105 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 SNORA31.6-201ENST00000516241 130 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 CR383656.8-201ENST00000549046 145 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 TRAV32-201ENST00000553993 340 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 VN1R107P-201ENST00000601784 209 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 AC011890.2-201ENST00000613393 294 ntBASIC4.06□□□□□ -1.76
CDK11AQ9UQ88 MTND4P27-201ENST00000450813 1354 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNU6-858P-201ENST00000362436 107 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNU6-942P-201ENST00000363002 107 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNU6-694P-201ENST00000364071 147 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 MIR517A-201ENST00000385001 87 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNU4-14P-201ENST00000410858 122 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNU6-1328P-201ENST00000410938 106 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RN7SKP192-201ENST00000411291 327 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AL591043.1-201ENST00000432461 424 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 DAP3P1-201ENST00000441522 278 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AC010095.1-201ENST00000443543 144 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AL441985.1-201ENST00000457727 251 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 UBL5P3-201ENST00000475112 231 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 MRPL42P6-201ENST00000486397 371 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNA5SP320-201ENST00000516263 124 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AC103996.1-201ENST00000555468 102 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 MIR4635-201ENST00000583759 79 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AC018889.1-201ENST00000605372 397 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 AC133104.2-201ENST00000615272 193 ntBASIC4.05□□□□□ -1.76
CDK11AQ9UQ88 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 MTND4P23-201ENST00000447723 1363 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 Y_RNA.151-201ENST00000363566 112 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 RNU4-76P-201ENST00000364509 141 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 Y_RNA.315-201ENST00000365117 102 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 MIR592-201ENST00000384959 97 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 RNU6-1245P-201ENST00000411130 106 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 RNU6-325P-201ENST00000411132 105 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 AC023141.11-201ENST00000508864 202 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 Y_RNA.708-201ENST00000516950 96 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 AC018462.2-201ENST00000605375 395 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 AL133215.3-201ENST00000609801 448 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 AC022140.2-201ENST00000623500 188 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 AC006026.1-201ENST00000444025 1803 ntBASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDK11AQ9UQ88 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 RNU6-428P-201ENST00000362942 107 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 SNORD116-20-201ENST00000384529 92 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 RNU6-748P-201ENST00000384648 107 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 RPS29P13-201ENST00000402041 169 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 FTH1P15-201ENST00000406984 280 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 RPS29P6-201ENST00000438196 145 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 SNORD5.1-201ENST00000458800 75 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 AC009163.5-201ENST00000575421 637 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 MIR3199-1-201ENST00000582434 88 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 AL050343.2-201ENST00000607338 280 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 AC005046.1-201ENST00000608515 625 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 MIR3529-201ENST00000637713 78 ntBASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDK11AQ9UQ88 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 U8.2-201ENST00000363156 134 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 RNU6-105P-201ENST00000363909 104 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 MIR181B1-201ENST00000385240 110 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 AC133134.1-201ENST00000466800 359 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 ANXA2P1-201ENST00000505539 926 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 ACA59.1-201ENST00000515966 143 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 ACA59.2-201ENST00000517061 156 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 Y_RNA.718-201ENST00000517110 102 ntBASIC4.02□□□□□ -1.77
CDK11AQ9UQ88 AL133255.1-201ENST00000606374 441 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms