Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.151-201ENST00000363566 112 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 SNORA51.4-201ENST00000364993 124 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RNU6-898P-201ENST00000365627 104 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RNU6-331P-201ENST00000384724 107 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 Z98742.3-201ENST00000418637 326 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AL358176.2-201ENST00000425769 204 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 USMG5P1-201ENST00000425964 177 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AL358075.3-201ENST00000426289 226 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AL161651.1-201ENST00000440882 223 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RPS29P21-201ENST00000496272 170 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AC116655.1-201ENST00000508324 901 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RNU6-470P-201ENST00000515954 104 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.661-201ENST00000516003 99 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 SCARNA16.2-201ENST00000516520 172 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RNA5SP384-201ENST00000516615 116 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 RNU6-56P-201ENST00000516986 93 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 CR383656.8-201ENST00000549046 145 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 MIR4680-201ENST00000580906 66 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 MIR4524B-201ENST00000581569 115 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 OR1M4P-201ENST00000589199 287 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 BNIP3P16-201ENST00000589779 534 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AC007485.1-201ENST00000616755 206 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 AL078596.1-201ENST00000624856 447 ntBASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SCAF8Q9UPN6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC010889.1-201ENST00000566193 2666 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 MIR148B-201ENST00000362252 99 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.158-201ENST00000363651 101 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 RNU1-100P-201ENST00000365255 165 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 MIR181A2-201ENST00000384863 110 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 MIR517A-201ENST00000385001 87 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 RNU6-1106P-201ENST00000390845 107 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 MRPL42P3-201ENST00000401492 326 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 PGBD4P6-201ENST00000421501 610 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC003982.1-202ENST00000469928 248 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 RPS27P26-201ENST00000494583 239 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC096725.1-201ENST00000514266 313 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 RNU6-120P-201ENST00000516077 103 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 RNU6-699P-201ENST00000517081 110 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC008121.1-201ENST00000603244 268 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SCAF8Q9UPN6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.2-201ENST00000362330 96 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNU6-490P-201ENST00000362985 107 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNU6-1309P-201ENST00000363305 108 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNU6-842P-201ENST00000384269 107 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNU6-463P-201ENST00000384340 107 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNY1P14-201ENST00000384426 108 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.496-201ENST00000384444 101 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNU6-748P-201ENST00000384648 107 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 MIR512-1-201ENST00000384913 84 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC022493.2-201ENST00000506122 481 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 SNORA25.10-201ENST00000515926 124 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.687-201ENST00000516558 91 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 MIR3671-201ENST00000580455 88 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RPL23AP78-201ENST00000599928 470 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AL391813.1-201ENST00000603098 260 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 RNU6-91P-201ENST00000607774 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms