Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RN7SL703P-201ENST00000578485 302 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 AL451007.1-201ENST00000595491 289 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 MIR486-1-201ENST00000612171 68 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 uc_338.32-201ENST00000615087 172 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 AC068724.3-201ENST00000625906 87 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 MIR3529-201ENST00000637713 78 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 AL353746.1-201ENST00000566293 6881 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 RNU6-799P-201ENST00000363567 107 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 RNA5SP515-201ENST00000364570 118 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 RNA5SP189-201ENST00000364920 115 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.400-201ENST00000383963 111 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.412-201ENST00000384001 104 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 MIR607-201ENST00000385241 96 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AL357075.1-201ENST00000404107 726 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 ELOCP21-201ENST00000412558 336 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AC012306.1-201ENST00000423267 114 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 BTF3P11-201ENST00000426582 477 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 FTH1P6-201ENST00000430768 320 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 RNU6-313P-201ENST00000516317 112 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 RNA5SP164-201ENST00000516533 110 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AP002001.1-203ENST00000534002 267 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 TOMM20P2-201ENST00000540082 421 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AC009163.5-201ENST00000575421 637 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 DEFB117-201ENST00000602356 141 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 USP8P1-201ENST00000494673 3183 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 ADAM3A-203ENST00000461344 2157 ntBASIC3.95□□□□□ -1.78
AP4E1Q9UPM8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 AC007656.2-201ENST00000624902 4547 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 AC092593.1-201ENST00000515413 1815 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.7-201ENST00000362352 102 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.343-201ENST00000365354 112 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 RNU6-449P-201ENST00000383914 107 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 RNU6-622P-201ENST00000384272 103 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 RNU1-89P-201ENST00000384592 164 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 SNORA71B-202ENST00000439232 272 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 AC007215.1-201ENST00000464893 276 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 AC091179.3-201ENST00000474761 144 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 RN7SKP21-201ENST00000516503 220 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 RNU6-62P-201ENST00000516526 102 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 SNORA31.16-201ENST00000516773 139 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 SCARNA14-201ENST00000516903 136 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 CYCSP30-201ENST00000546447 172 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 AC004467.1-201ENST00000615678 330 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 AL354798.1-201ENST00000622505 329 ntBASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
AP4E1Q9UPM8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.23-201ENST00000362496 106 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.75-201ENST00000362927 97 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.179-201ENST00000363844 90 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 RNU4-84P-201ENST00000364200 139 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.238-201ENST00000364441 102 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 RNU6-1280P-201ENST00000365211 107 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 RNU4-17P-201ENST00000365598 141 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.488-201ENST00000384403 102 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 SNORA22C-201ENST00000384614 134 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 MIR186-201ENST00000384988 86 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.586-201ENST00000391146 98 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 RNU2-2P-201ENST00000410396 191 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 RNU6-155P-201ENST00000516347 100 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 MIR2114-201ENST00000516645 80 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 MIR3160-1-201ENST00000577972 85 ntBASIC3.93□□□□□ -1.78
AP4E1Q9UPM8 AC087499.8-201ENST00000578406 226 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms