Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RBBP4P6-201ENST00000508098 202 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 DEFB131E-202ENST00000602581 683 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AC090578.1-201ENST00000604955 591 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 RMST_6.1-201ENST00000611980 203 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AC009159.2-201ENST00000617603 606 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AC130454.1-201ENST00000622948 401 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AC019226.2-201ENST00000625973 424 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 Y_RNA.597-201ENST00000410463 100 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 NCOR1P3-201ENST00000420479 303 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 AC104850.1-201ENST00000435940 476 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 AC007969.2-201ENST00000441891 191 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 MTCYBP35-201ENST00000503630 1137 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 MTCO3P9-201ENST00000506989 781 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 ATP5EP1-201ENST00000510257 156 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 SNORD27.1-201ENST00000516319 72 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 RNU6-410P-201ENST00000517006 107 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 MTND5P35-201ENST00000557537 1720 ntBASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.68□□□□□ -2.14
CTNNA3Q9UI47 Y_RNA.67-201ENST00000362870 100 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 SNORD56.1-201ENST00000362913 68 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 RNU6-160P-201ENST00000384591 107 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 Y_RNA.576-201ENST00000384781 102 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 MIR7-2-201ENST00000384970 110 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 MIR613-201ENST00000385248 95 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 RNA5SP100-201ENST00000410903 110 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 RNA5SP59-201ENST00000410922 110 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 OR6C66P-201ENST00000414917 930 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 RPL21P90-201ENST00000415692 466 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 CBX3P6-201ENST00000430257 527 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AL035666.1-201ENST00000446195 348 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AL033528.1-201ENST00000453780 140 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 SNORD42A-201ENST00000459584 64 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 RPL30P12-201ENST00000474666 353 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 RNA5SP102-201ENST00000516865 106 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AC137800.2-201ENST00000574375 120 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 MIR4760-201ENST00000585040 80 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AP001485.1-201ENST00000604799 199 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AL121992.2-201ENST00000606262 256 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AP001506.1-201ENST00000615444 211 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AC063943.3-201ENST00000615562 356 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 AC026585.1-201ENST00000619582 524 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 MIR6734-201ENST00000621166 68 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 Z69720.2-201ENST00000624755 279 ntBASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.67□□□□□ -2.14
CTNNA3Q9UI47 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 CYCSP33-201ENST00000414485 327 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 RPS15AP10-201ENST00000432472 382 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 GMFBP1-201ENST00000467831 427 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AC114801.2-201ENST00000503825 781 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 MTND2P33-201ENST00000506452 1031 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AC079140.5-201ENST00000507882 310 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AL133173.2-201ENST00000614270 90 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 U4.7-201ENST00000638126 106 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 AL161722.3-201ENST00000605789 2983 ntBASIC1.66□□□□□ -2.14
CTNNA3Q9UI47 RNU6-78P-201ENST00000362897 107 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 Y_RNA.112-201ENST00000363250 102 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 RNU6-74P-201ENST00000384235 107 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 RNU6-1222P-201ENST00000384615 107 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 MIR454-201ENST00000390180 115 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 RNA5SP111-201ENST00000411386 101 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 HMGN1P14-201ENST00000412459 517 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 CYCSP46-201ENST00000423569 204 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 GPR143P-201ENST00000434155 205 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 RNA5SP269-201ENST00000459032 137 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 AC115990.1-201ENST00000526957 301 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 MIR4775-201ENST00000581168 75 ntBASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.65□□□□□ -2.15
CTNNA3Q9UI47 AC073539.2-201ENST00000597113 165 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms