Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC011005.2-201ENST00000487324 359 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 RNU6-889P-201ENST00000517189 103 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC093249.1-201ENST00000567049 203 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC104408.1-201ENST00000605241 170 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AC078938.1-201ENST00000620993 318 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 AP000943.4-201ENST00000622912 357 ntBASIC-0.32□□□□□ -2.46
SCN11AQ9UI33 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 MIR106A-201ENST00000384870 81 ntBASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 MTCYBP43-201ENST00000513621 740 ntBASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 AC117525.1-201ENST00000515228 503 ntBASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 SNORD116-30-201ENST00000516468 85 ntBASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 AC136475.10-201ENST00000620253 385 ntBASIC-0.33□□□□□ -2.46
SCN11AQ9UI33 RNA5SP451-201ENST00000410588 110 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 MTND1P20-201ENST00000430341 950 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 MTND5P2-201ENST00000442927 1142 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RPS27AP8-201ENST00000452665 445 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL132657.2-201ENST00000564417 358 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL357094.1-201ENST00000603845 844 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL031281.1-201ENST00000604049 488 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 SUMO2P14-201ENST00000604488 293 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 MTND4P5-201ENST00000435821 1374 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNU6-944P-201ENST00000364023 107 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNA5SP222-201ENST00000411039 105 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AC010385.1-201ENST00000412374 256 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL592310.1-201ENST00000414330 671 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 NFU1P2-201ENST00000448700 469 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNU7-21P-201ENST00000459430 62 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 SNORD39.3-201ENST00000584451 71 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AL357312.1-201ENST00000603879 298 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNU4-5P-201ENST00000607255 135 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 AC100810.6-201ENST00000638068 285 ntBASIC-0.34□□□□□ -2.46
SCN11AQ9UI33 RNU6-46P-201ENST00000383860 107 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 DHFRP6-201ENST00000401776 268 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 AL133475.1-201ENST00000404414 305 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 COX6CP10-201ENST00000416832 224 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 MTATP6P27-201ENST00000416987 621 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 MTND1P28-201ENST00000435623 950 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 AC022364.2-201ENST00000457963 554 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 AC137800.2-201ENST00000574375 120 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 MIR4743-201ENST00000584576 69 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 AP005212.4-201ENST00000614206 710 ntBASIC-0.35□□□□□ -2.47
SCN11AQ9UI33 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 RNA5SP259-201ENST00000365541 109 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 SNORA16.2-201ENST00000390991 127 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 AL392003.1-201ENST00000434394 243 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 RNU6-390P-201ENST00000516259 103 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 RNA5SP67-201ENST00000516422 131 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 AC011195.1-201ENST00000578177 177 ntBASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
SCN11AQ9UI33 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 PSMA6P3-201ENST00000428242 164 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC069257.2-201ENST00000441819 155 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 MTND4P19-201ENST00000446659 478 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 snoU13.30-201ENST00000458951 104 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 RNU2-53P-201ENST00000516257 147 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 SNORA40.12-201ENST00000516329 111 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 RNA5SP437-201ENST00000517249 129 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 MRPS36P5-201ENST00000551909 298 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AL079343.1-201ENST00000572358 1771 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC064807.4-201ENST00000607201 407 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 SNORA9.1-201ENST00000362412 131 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 SNORA18.1-201ENST00000363418 128 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC011233.1-201ENST00000422812 283 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 RPL7P55-201ENST00000450522 746 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 AC097473.1-201ENST00000508142 408 ntBASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.37□□□□□ -2.47
SCN11AQ9UI33 RNU6-528P-201ENST00000516926 100 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms