Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 MIR4709-201ENST00000577272 72 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 MIR4781-201ENST00000585250 76 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 MIR15A-201ENST00000607334 83 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL353149.1-201ENST00000610667 244 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 MIR6504-201ENST00000613520 61 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL159152.1-201ENST00000635019 2587 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 RNU4-15P-201ENST00000362613 141 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 SNORD56.1-201ENST00000362913 68 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 U3.8-201ENST00000363675 217 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 snoZ40.1-201ENST00000364540 72 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 MIR10A-201ENST00000385043 110 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 SNORA12-201ENST00000391162 147 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 EEF1E1P1-201ENST00000446998 430 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 MTCO1P27-201ENST00000448269 226 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AL122001.1-201ENST00000457027 370 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AC119751.4-201ENST00000507498 357 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 MTCO3P28-201ENST00000513351 515 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 Y_RNA.687-201ENST00000516558 91 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AC115990.1-201ENST00000526957 301 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AC023050.2-201ENST00000544968 387 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 BNIP3P6-201ENST00000549284 499 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AL132657.2-201ENST00000564417 358 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AC124016.2-201ENST00000610058 665 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 AL359740.1-201ENST00000624340 592 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
COMMD3Q9UBI1 ELL2P3-201ENST00000457883 1602 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AL442644.1-201ENST00000454390 3105 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 RNU6-1235P-201ENST00000384559 107 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 MIR942-201ENST00000401111 86 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC098934.3-201ENST00000430450 190 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 MTCO3P18-201ENST00000440206 761 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC245047.7-201ENST00000440265 293 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 ART2BP-201ENST00000453501 499 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 RNU6-498P-201ENST00000459468 107 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC022447.4-201ENST00000504053 364 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 MTCO3P7-201ENST00000510008 774 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC112206.3-201ENST00000514578 389 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AC016727.2-201ENST00000603988 621 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AL034555.1-201ENST00000604816 211 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 MIR6788-201ENST00000618842 66 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 AL158163.2-201ENST00000619110 700 ntBASIC0.27□□□□□ -2.37
COMMD3Q9UBI1 RNU6-621P-201ENST00000364752 109 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 SNORA4.2-201ENST00000365313 147 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 RNU6-969P-201ENST00000383900 105 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 RNU6-945P-201ENST00000383947 107 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 RNU6-190P-201ENST00000384154 102 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 SNORA12.2-201ENST00000391040 156 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 MIR1284-201ENST00000408337 120 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC092809.3-201ENST00000415453 231 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 MTCYBP39-201ENST00000437562 491 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC073910.1-201ENST00000445047 438 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC016925.1-201ENST00000458303 298 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC048334.1-201ENST00000477975 159 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AP003355.1-201ENST00000518956 587 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC022784.5-201ENST00000522241 437 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 MIR151B-201ENST00000584249 96 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC021506.2-201ENST00000612354 169 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC024940.5-201ENST00000622889 474 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 AC104985.3-201ENST00000623479 597 ntBASIC0.26□□□□□ -2.37
COMMD3Q9UBI1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 RNU6-1285P-201ENST00000363480 105 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 AF228730.1-201ENST00000397972 663 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 MIR548J-201ENST00000408833 112 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 RNA5SP111-201ENST00000411386 101 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 AC093899.1-201ENST00000457984 376 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 AC010531.2-201ENST00000465012 153 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 MIR5000-201ENST00000577717 103 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 MIR4742-201ENST00000581069 85 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 MIR4452-201ENST00000583004 71 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 AC068620.3-201ENST00000602749 560 ntBASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.25□□□□□ -2.37
COMMD3Q9UBI1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 SNORA25.9-201ENST00000365087 128 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms