Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.28□□□□□ -1.72
CXXC1Q9P0U4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.28□□□□□ -1.72
CXXC1Q9P0U4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
CXXC1Q9P0U4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXXC1Q9P0U4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXXC1Q9P0U4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXXC1Q9P0U4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 RNU6-774P-201ENST00000363238 107 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 RNU6-529P-201ENST00000363383 104 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 RNA5SP97-201ENST00000365006 84 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 RNU6-47P-201ENST00000383866 107 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AP000567.1-201ENST00000406413 156 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 SNORD2.1-201ENST00000458762 69 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 EIF4A1P12-201ENST00000551910 141 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AC006380.1-201ENST00000603598 186 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AC011921.3-201ENST00000605540 361 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AC012603.1-201ENST00000606424 528 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 AL049781.1-201ENST00000623195 3585 ntBASIC4.27□□□□□ -1.73
CXXC1Q9P0U4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 AF127577.6-201ENST00000623352 2191 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.101-201ENST00000363154 102 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 RNA5SP201-201ENST00000410316 124 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.662-201ENST00000516028 97 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 SNORA31.21-201ENST00000517180 77 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 AC010620.2-201ENST00000600135 313 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 PCGEM1.1-201ENST00000613431 131 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 AC092628.2-201ENST00000622492 339 ntBASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXXC1Q9P0U4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.40-201ENST00000362645 93 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 RNU4-80P-201ENST00000363200 141 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 RNU6-1210P-201ENST00000363775 107 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 U3.9-201ENST00000363823 204 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 SNORD96B-201ENST00000386148 79 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 RNU2-54P-201ENST00000410299 190 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AC115115.1-201ENST00000449927 248 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AP001324.2-201ENST00000461163 319 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 RN7SL601P-201ENST00000471221 293 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 RNU6-107P-201ENST00000516643 102 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.703-201ENST00000516846 111 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AL137843.1-201ENST00000605078 385 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AC005828.6-201ENST00000606610 232 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 SNORD11B-201ENST00000607707 90 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AC005562.2-201ENST00000618264 111 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 AC140113.4-201ENST00000622087 222 ntBASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.25□□□□□ -1.73
CXXC1Q9P0U4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RNU6-655P-201ENST00000362858 107 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.217-201ENST00000364214 105 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RNA5SP51-201ENST00000364750 119 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RNU6-1264P-201ENST00000383891 107 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 MIR490-201ENST00000384865 128 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 MIR128-1-201ENST00000384921 82 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 MIR186-201ENST00000384988 86 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RNA5SP252-201ENST00000391131 119 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 AIMP1P2-201ENST00000425294 312 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 AC024067.1-201ENST00000426199 223 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.641-201ENST00000459414 105 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 TCL6_2.1-201ENST00000615162 119 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms