Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-818P-201ENST00000364837 108 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU6-898P-201ENST00000365627 104 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORD116-14-201ENST00000383894 92 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU6-449P-201ENST00000383914 107 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORD116-17-201ENST00000383929 92 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU6-166P-201ENST00000384371 107 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORD116-15-201ENST00000384445 92 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORD116-20-201ENST00000384529 92 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU6-21P-201ENST00000384710 107 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORD116-19-201ENST00000384729 92 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 MIR490-201ENST00000384865 128 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORA40C-201ENST00000391285 128 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RPS4XP3-201ENST00000398541 413 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 UBA52P6-201ENST00000399822 382 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AC244098.2-201ENST00000422068 99 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RPS15AP7-201ENST00000439294 405 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AL353705.4-201ENST00000449661 238 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AP001486.1-201ENST00000463339 476 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RPL30P1-201ENST00000488676 339 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AL160314.1-201ENST00000490836 438 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 SNORD116-25-201ENST00000516517 92 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RNU6-1256P-201ENST00000516539 103 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 RN7SKP289-201ENST00000517244 295 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AC099506.2-201ENST00000623074 221 ntBASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.03□□□□□ -1.76
LMCD1Q9NZU5 AC004925.1-201ENST00000624256 2706 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 Y_RNA.71-201ENST00000362892 104 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 RNA5SP235-201ENST00000365411 114 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 RNU6-629P-201ENST00000384061 103 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 U3.19-201ENST00000390893 196 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 SNORD12B-201ENST00000410433 91 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 RBMY2UP-201ENST00000453474 324 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AC092798.1-201ENST00000458542 409 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 SNORD108-201ENST00000459332 71 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AP001025.1-201ENST00000486139 332 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 RPL21P9-201ENST00000556149 474 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 AL670379.2-201ENST00000604983 252 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 MIR7851-201ENST00000610611 160 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 MIR8058-201ENST00000615737 89 ntBASIC4.02□□□□□ -1.77
LMCD1Q9NZU5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNA5SP361-201ENST00000362686 118 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU6-78P-201ENST00000362897 107 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 Y_RNA.308-201ENST00000365043 101 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU6-968P-201ENST00000384076 107 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU6-514P-201ENST00000384208 107 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU6-17P-201ENST00000384245 107 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU6-18P-201ENST00000384527 107 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 MIR128-1-201ENST00000384921 82 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU5A-5P-201ENST00000411054 116 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 Z85995.1-201ENST00000415547 335 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 PTGES3P4-201ENST00000426243 356 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 AC005326.1-201ENST00000429197 123 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 MTCO1P5-201ENST00000433573 344 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RPL23AP94-201ENST00000512518 302 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNU6-971P-201ENST00000516920 106 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RNA5SP165-201ENST00000517142 115 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 AC022695.1-201ENST00000522089 237 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 RPL23AP88-201ENST00000605759 454 ntBASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.01□□□□□ -1.77
LMCD1Q9NZU5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMCD1Q9NZU5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMCD1Q9NZU5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
LMCD1Q9NZU5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LMCD1Q9NZU5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 DEFB108F-201ENST00000344638 222 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 RNU1-18P-201ENST00000363062 164 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 RNU6-527P-201ENST00000363425 104 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 U3.15-201ENST00000365398 212 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 RNU6-1289P-201ENST00000384431 106 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 U3.26-201ENST00000391236 204 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 MTHFD2P2-201ENST00000407725 247 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 HMGB1P37-201ENST00000439613 609 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 AL078601.1-201ENST00000444542 271 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 DCLRE1CP1-201ENST00000454630 470 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 SNORD2.1-201ENST00000458762 69 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms