Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RNA5SP171-201ENST00000391071 115 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 MIR208B-201ENST00000401172 77 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AL590556.1-201ENST00000423231 483 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 RPL21P2-201ENST00000440049 481 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 PRSS3P4-201ENST00000453323 162 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 RNU7-175P-201ENST00000515915 61 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 RN7SKP40-201ENST00000517211 242 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AL080274.1-201ENST00000605565 220 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 MIR7975-201ENST00000619350 68 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AC090971.5-201ENST00000621102 293 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 AC000403.1-201ENST00000613696 3585 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RNU6-378P-201ENST00000384324 107 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 SNORA46-201ENST00000384762 135 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 MIR490-201ENST00000384865 128 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 MIR29B2-201ENST00000385055 81 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RNU6-700P-201ENST00000391043 107 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 MTCYBP2-201ENST00000407745 171 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RNA5SP201-201ENST00000410316 124 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 CKS1BP2-201ENST00000497342 240 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC110794.1-201ENST00000505816 425 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 SLC25A15P5-201ENST00000508033 253 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 RNU6-586P-201ENST00000517265 104 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC104581.2-201ENST00000572227 430 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 CYP2C61P-201ENST00000604072 290 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AL138963.2-201ENST00000605137 226 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC073657.2-201ENST00000605661 303 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC137590.2-201ENST00000619709 240 ntBASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LIN7CQ9NUP9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
LIN7CQ9NUP9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 RNU6-490P-201ENST00000362985 107 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.463-201ENST00000384271 102 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MIR487A-201ENST00000385009 80 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MIR34B-201ENST00000385076 84 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 SNORA46.1-201ENST00000391069 153 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 SNORA12-201ENST00000391162 147 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 RNU6-1093P-201ENST00000391194 107 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 RPL21P3-201ENST00000395517 478 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MTCYBP10-201ENST00000424905 650 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 TOMM22P6-201ENST00000465035 409 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.701-201ENST00000516812 110 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 RNU6-699P-201ENST00000517081 110 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 SUB1P3-201ENST00000564581 315 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AC004584.2-201ENST00000570407 410 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AL162713.1-201ENST00000604480 262 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AL355802.3-201ENST00000607571 545 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MIR1244-1-201ENST00000612829 85 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AC005520.5-201ENST00000613926 164 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MIR1244-3-201ENST00000635744 85 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MIR1244-2-201ENST00000636449 85 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MIR1244-4-202ENST00000636813 85 ntBASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
LIN7CQ9NUP9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 RNU6-1115P-201ENST00000362490 106 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 SNORA63.1-201ENST00000362493 131 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.197-201ENST00000364004 102 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 RNU6-944P-201ENST00000364023 107 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 SNORD115-32-201ENST00000364079 82 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms