Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU6-336P-201ENST00000364891 107 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 SNORA48.3-201ENST00000391081 134 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 EIF1P1-201ENST00000421436 341 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 DPH3P2-201ENST00000422618 250 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AC243964.1-201ENST00000441814 261 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 RPL39P29-201ENST00000447779 157 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 RNU7-138P-201ENST00000459479 64 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 RPL30P1-201ENST00000488676 339 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 MIR5002-201ENST00000584713 97 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AC009314.1-201ENST00000603871 304 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AC107304.1-201ENST00000604229 296 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AL356157.2-201ENST00000605122 111 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 CTHRC1P1-201ENST00000605383 469 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AC104458.1-201ENST00000608243 463 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 MIR6840-201ENST00000611937 71 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 AC245884.12-201ENST00000615364 59 ntBASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SMC4Q9NTJ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 U8.2-201ENST00000363156 134 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 MIR561-201ENST00000385216 97 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 AL031659.1-201ENST00000447075 539 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 AL139109.1-201ENST00000455491 297 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 RNU6-1208P-201ENST00000459588 107 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 RPL30P12-201ENST00000474666 353 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 Y_RNA.654-201ENST00000497848 106 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 RPL38P4-201ENST00000502376 214 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 MIR1273D-201ENST00000577266 86 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 AP003465.2-201ENST00000602571 373 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 AC092794.1-201ENST00000612734 582 ntBASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SMC4Q9NTJ3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 RNU6-428P-201ENST00000362942 107 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 RNU1-148P-201ENST00000384472 162 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 MIR29B2-201ENST00000385055 81 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 SNORD73A-201ENST00000386062 65 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AL023284.1-201ENST00000403956 276 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 RN7SKP158-201ENST00000410453 326 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 RN7SKP223-201ENST00000410582 62 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 SRIP2-201ENST00000428470 166 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 MRPS10P2-201ENST00000431226 381 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 ERLEC1P1-201ENST00000433806 578 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC079804.2-201ENST00000490376 200 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 Y_RNA.665-201ENST00000516177 98 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 BNIP3P25-201ENST00000596023 559 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 RNU6-85P-201ENST00000605989 107 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AC097372.5-201ENST00000623665 376 ntBASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMC4Q9NTJ3 AP000560.1-201ENST00000624150 1937 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 Y_RNA.373-201ENST00000365600 103 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 SNORA6-201ENST00000384033 151 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 SNORA64-201ENST00000384674 134 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 MIR544A-201ENST00000384855 91 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1148P-201ENST00000410992 104 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 RNU6-293P-201ENST00000411259 106 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 AC009238.1-201ENST00000442165 424 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 AC009237.6-201ENST00000446969 424 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 NFU1P2-201ENST00000448700 469 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 HMGN2P26-201ENST00000463169 339 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 MTCYBP18-201ENST00000501056 747 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 ANXA2P1-201ENST00000505539 926 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 MIR3662-201ENST00000637030 95 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 AC121333.1-201ENST00000567488 2709 ntBASIC2.7□□□□□ -1.98
SMC4Q9NTJ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 RNU6-1141P-201ENST00000364520 107 ntBASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SMC4Q9NTJ3 RN7SKP32-201ENST00000410167 303 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms