Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC092106.3-201ENST00000611308 722 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CISHQ9NSE2 AL138955.1-201ENST00000622881 1040 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 AC103706.2-201ENST00000638080 240 ntBASIC0.76□□□□□ -2.29
CISHQ9NSE2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.76□□□□□ -2.29
CISHQ9NSE2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CISHQ9NSE2 RNU4-15P-201ENST00000362613 141 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 RNU6-1285P-201ENST00000363480 105 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 SNORA63D-201ENST00000364359 132 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 RNU6-1019P-201ENST00000364424 107 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 MIR578-201ENST00000384828 96 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 RNU6-1176P-201ENST00000390955 107 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.75□□□□□ -2.29
CISHQ9NSE2 MTCO3P41-201ENST00000414801 328 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 MTCO1P21-201ENST00000416634 589 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.75□□□□□ -2.29
CISHQ9NSE2 SNX2P2-201ENST00000424553 323 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 AL591043.1-201ENST00000432461 424 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 MTCYBP39-201ENST00000437562 491 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 AC069257.2-201ENST00000441819 155 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.75□□□□□ -2.29
CISHQ9NSE2 AL163195.1-201ENST00000496941 348 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 FABP5P5-201ENST00000515537 406 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 MIR449C-201ENST00000516047 92 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 RNA5SP384-201ENST00000516615 116 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 AC123904.2-201ENST00000548059 300 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 HSPE1P4-201ENST00000550617 308 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 MIR3136-201ENST00000583498 78 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 AC012409.4-201ENST00000612923 249 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.75□□□□□ -2.29
CISHQ9NSE2 AC009541.1-201ENST00000438279 2662 ntBASIC0.75□□□□□ -2.29
CISHQ9NSE2 RNU6-142P-201ENST00000384019 107 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 MIR515-2-201ENST00000384883 83 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 MIR515-1-201ENST00000384884 83 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 AL031779.1-201ENST00000415663 330 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.74□□□□□ -2.29
CISHQ9NSE2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
CISHQ9NSE2 AC145146.1-201ENST00000496370 254 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 SNORA19.3-201ENST00000516165 130 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 DEFB131E-202ENST00000602581 683 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 MZT1P2-201ENST00000604387 248 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 AC121334.2-201ENST00000605387 271 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 AL139286.2-201ENST00000606838 396 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 BX284668.6-201ENST00000606899 438 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 AC131159.1-201ENST00000621854 213 ntBASIC0.74□□□□□ -2.29
CISHQ9NSE2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CISHQ9NSE2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
CISHQ9NSE2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 RNY4P16-201ENST00000364768 94 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 RNU5E-7P-201ENST00000365290 117 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 SNORA25-201ENST00000384384 134 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 MIR194-1-201ENST00000384892 85 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC099677.2-201ENST00000436385 175 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AL360271.2-201ENST00000447710 161 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 ATP5J2P3-201ENST00000451550 258 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC117454.1-201ENST00000491120 168 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 MTND3P5-201ENST00000512798 333 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC107934.1-201ENST00000522215 217 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC136932.1-201ENST00000574771 208 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 MIR5697-201ENST00000578045 78 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AL590229.1-201ENST00000603497 542 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AL158032.1-201ENST00000605401 106 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 AL139022.2-201ENST00000606934 443 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 RNU6-87P-201ENST00000607561 108 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CISHQ9NSE2 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.73□□□□□ -2.29
CISHQ9NSE2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.73□□□□□ -2.29
CISHQ9NSE2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CISHQ9NSE2 Y_RNA.238-201ENST00000364441 102 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 RNU6-438P-201ENST00000365561 103 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 MIR544A-201ENST00000384855 91 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CISHQ9NSE2 SNORA12-201ENST00000391162 147 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 RPS20P2-201ENST00000402520 389 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 SNRPEP8-201ENST00000442866 260 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 AC132479.1-201ENST00000449160 144 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 ART2BP-201ENST00000453501 499 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.72□□□□□ -2.29
CISHQ9NSE2 SNRPFP3-201ENST00000457792 225 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.72□□□□□ -2.29
CISHQ9NSE2 AC104806.1-201ENST00000508720 308 ntBASIC0.72□□□□□ -2.29
CISHQ9NSE2 MTND2P31-201ENST00000512602 616 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms