Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-428P-201ENST00000362942 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 Y_RNA.124-201ENST00000363339 93 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-11P-201ENST00000364234 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU4-38P-201ENST00000364472 129 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-60P-201ENST00000364792 103 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 SNORD114-24-201ENST00000365029 72 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-25P-201ENST00000383873 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1-201ENST00000383898 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-157P-201ENST00000383957 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-418P-201ENST00000384035 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-48P-201ENST00000384161 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-36P-201ENST00000384172 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-4P-201ENST00000384205 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-5P-201ENST00000384238 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-3P-201ENST00000384314 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-16P-201ENST00000384385 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-15P-201ENST00000384534 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-2-201ENST00000384627 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-29P-201ENST00000384637 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-9-201ENST00000384776 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-33P-201ENST00000384793 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 MIR222-201ENST00000384992 110 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 MIR504-201ENST00000385065 83 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-910P-201ENST00000390844 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 SNORD12-201ENST00000391002 90 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AL627390.1-201ENST00000396055 340 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1245P-201ENST00000411130 106 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNA5SP111-201ENST00000411386 101 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC063976.4-201ENST00000421971 163 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 DPH3P2-201ENST00000422618 250 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RPS24P1-201ENST00000438550 371 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC025750.2-201ENST00000442609 450 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RPS27P1-201ENST00000450552 247 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RN7SL542P-201ENST00000467147 294 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC048334.1-201ENST00000477975 159 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RAP1BP2-201ENST00000478270 544 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AL163973.1-201ENST00000484753 577 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC010587.1-201ENST00000505809 469 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 PDCD5P2-201ENST00000507570 312 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC116347.2-201ENST00000514912 523 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-377P-201ENST00000515965 102 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA31.2-201ENST00000516019 134 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 SNORD79.1-201ENST00000516069 84 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 SUMO2P16-201ENST00000519475 264 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AL590705.4-201ENST00000532209 134 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC023050.3-201ENST00000541142 333 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 HSPE1P4-201ENST00000550617 308 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC023043.2-201ENST00000589678 1026 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 BNIP3P33-201ENST00000598912 569 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC016727.2-201ENST00000603988 621 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AL356157.2-201ENST00000605122 111 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-6P-201ENST00000606623 107 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 MIR7106-201ENST00000612419 65 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 AC019226.2-201ENST00000625973 424 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
CDC42SE1Q9NRR8 AC092268.1-201ENST00000342691 405 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 Y_RNA.324-201ENST00000365165 102 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 MIR605-201ENST00000385078 83 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 MORN2-202ENST00000409077 465 ntTSL 5 BASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 MTCO2P21-201ENST00000419780 677 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 RPS27AP14-201ENST00000422868 454 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AC137499.1-201ENST00000427602 88 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 RPL22P17-201ENST00000438729 315 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 USP9YP25-201ENST00000457708 443 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 SNRPGP7-201ENST00000469016 106 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 RPS26P48-201ENST00000491713 339 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AC091874.1-201ENST00000511402 339 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AC108043.1-201ENST00000512696 574 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AP001893.2-201ENST00000526949 202 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 DEFB131C-201ENST00000528817 165 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AL121579.1-201ENST00000555129 305 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 MIR3160-1-201ENST00000577972 85 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AL390123.1-201ENST00000603216 237 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 Z98751.3-201ENST00000604447 521 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 MIR6866-201ENST00000638146 69 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 AC013437.2-201ENST00000639587 677 ntBASIC0.4□□□□□ -2.35
CDC42SE1Q9NRR8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-545P-201ENST00000362681 104 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RNU4-56P-201ENST00000364700 142 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA72.2-201ENST00000365028 127 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-969P-201ENST00000383900 105 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-45P-201ENST00000384471 107 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 Y_RNA.576-201ENST00000384781 102 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 MIR34B-201ENST00000385076 84 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA12.1-201ENST00000390873 148 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA17.3-201ENST00000391159 129 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AF228730.1-201ENST00000397972 663 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RPL21P1-201ENST00000399532 476 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-174P-201ENST00000410406 106 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 Z98742.3-201ENST00000418637 326 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 USP9YP28-201ENST00000435142 589 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms