Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AC091152.2-201ENST00000591628 2569 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 FTLP6-201ENST00000355274 422 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 Y_RNA.180-201ENST00000363867 113 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 Y_RNA.270-201ENST00000364693 104 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 RNU6-102P-201ENST00000384485 104 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 RNU6-658P-201ENST00000384606 106 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AL139156.1-201ENST00000412785 841 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AC002075.2-201ENST00000425207 252 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 RPL30P1-201ENST00000488676 339 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 FCF1P8-201ENST00000510322 597 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AC011602.1-201ENST00000546484 331 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 LINC00933-203ENST00000559812 219 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 H3F3AP1-201ENST00000559984 334 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 MIR3609-201ENST00000582661 80 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AC006023.1-201ENST00000603944 259 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 RPL23AP88-201ENST00000605759 454 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
PDLIM7Q9NR12 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MIR422A-201ENST00000362286 90 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 Y_RNA.200-201ENST00000364018 102 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 RNU6-898P-201ENST00000365627 104 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 RNU6-926P-201ENST00000384075 107 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 RNU6-17P-201ENST00000384245 107 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 RNU6-18P-201ENST00000384527 107 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MIR32-201ENST00000384965 70 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MIR518D-201ENST00000385014 87 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MIR591-201ENST00000385290 95 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 RPS29P31-201ENST00000446147 164 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 AL031659.1-201ENST00000447075 539 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 RNU6-496P-201ENST00000516145 99 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 AP004607.1-201ENST00000524456 203 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MIR4643-201ENST00000577473 78 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 AC020895.1-201ENST00000595362 272 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MIR7106-201ENST00000612419 65 ntBASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM7Q9NR12 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 RNU6-942P-201ENST00000363002 107 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 RNU6-843P-201ENST00000384454 104 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC243964.1-201ENST00000441814 261 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC016700.2-201ENST00000446011 156 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AL138752.1-201ENST00000452964 351 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC006026.2-201ENST00000457376 180 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC006445.2-201ENST00000510061 472 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC091874.1-201ENST00000511402 339 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 FTX_3.1-201ENST00000610451 147 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 RMST_6.1-201ENST00000611980 203 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 AC091903.1-201ENST00000624322 454 ntBASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.78□□□□□ -1.8
PDLIM7Q9NR12 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNU1-35P-201ENST00000362782 153 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNU6-879P-201ENST00000364328 108 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNA5SP126-201ENST00000365092 109 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNU6-1286P-201ENST00000383871 107 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNU6-318P-201ENST00000384283 103 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 SNORA44-201ENST00000384584 132 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 MIR1298-201ENST00000408783 112 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNU6-1077P-201ENST00000410506 102 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 AC098831.1-201ENST00000440661 216 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 AL136097.1-201ENST00000456945 913 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 SERF1AP1-201ENST00000514575 187 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RNU6-406P-201ENST00000516470 107 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 MIR4644-201ENST00000579929 84 ntBASIC3.77□□□□□ -1.81
PDLIM7Q9NR12 RPL12P50-201ENST00000603116 116 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms