Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.162-201ENST00000363683 102 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 SNORD115-32-201ENST00000364079 82 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 RNU6-1083P-201ENST00000384022 107 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 RNU6-639P-201ENST00000384074 107 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 SNORA48.8-201ENST00000391324 134 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 AL512633.1-201ENST00000399931 655 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 MCFD2P1-201ENST00000417812 300 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 snoU13.14-201ENST00000459372 104 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 HSPE1P4-201ENST00000550617 308 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 AC007375.1-201ENST00000554513 578 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 MIR5571-201ENST00000577998 113 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VTA1Q9NP79 MIR4672-201ENST00000583126 81 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 MIR3136-201ENST00000583498 78 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 RPL12P50-201ENST00000603116 116 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 AC110079.1-202ENST00000635213 138 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.42□□□□□ -1.86
VTA1Q9NP79 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VTA1Q9NP79 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC073325.2-201ENST00000339545 159 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 Y_RNA.39-201ENST00000362620 98 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 SNORA22B-201ENST00000383876 138 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 SNORA26.3-201ENST00000391119 136 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 RNU6-1156P-201ENST00000410365 100 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC244670.1-201ENST00000436879 112 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC004383.1-201ENST00000438135 289 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 MTND4P19-201ENST00000446659 478 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AL118496.2-201ENST00000448300 230 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC091826.1-201ENST00000514065 313 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 Y_RNA.661-201ENST00000516003 99 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 SCARNA11.3-201ENST00000517276 130 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC004584.2-201ENST00000570407 410 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 ELOCP29-201ENST00000588193 334 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC005034.5-201ENST00000604219 466 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC016925.2-201ENST00000605108 242 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 AL355802.3-201ENST00000607571 545 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC100812.1-201ENST00000607622 580 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AL159153.1-201ENST00000619688 317 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 AC243829.7-201ENST00000633081 225 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.41□□□□□ -1.86
VTA1Q9NP79 AL109809.4-201ENST00000603520 2185 ntBASIC3.41□□□□□ -1.86
VTA1Q9NP79 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.4□□□□□ -1.86
VTA1Q9NP79 RNU4-56P-201ENST00000364700 142 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 RNU6-851P-201ENST00000384565 107 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 snosnR66.1-201ENST00000391095 99 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 AC138623.1-201ENST00000418060 216 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 AL139281.1-201ENST00000422120 335 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 AL353997.1-201ENST00000432936 108 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 AL135938.1-201ENST00000443141 297 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 RNA5SP356-201ENST00000515972 94 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 RNA5SP367-201ENST00000516557 118 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.4□□□□□ -1.87
VTA1Q9NP79 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.4□□□□□ -1.87
VTA1Q9NP79 AC079598.5-201ENST00000547460 117 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 GTF3AP2-201ENST00000557014 266 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 RMST_6.1-201ENST00000611980 203 ntBASIC3.4□□□□□ -1.87
VTA1Q9NP79 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.4□□□□□ -1.87
VTA1Q9NP79 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VTA1Q9NP79 Y_RNA.31-201ENST00000362574 102 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 RNU6-529P-201ENST00000363383 104 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 RNU6-137P-201ENST00000363680 108 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 RNU6-99P-201ENST00000364721 107 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 RNU6-1160P-201ENST00000384546 104 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 BX679664.1-201ENST00000434429 253 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC009969.1-201ENST00000438726 172 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 GPM6BP3-201ENST00000442797 145 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AL353705.4-201ENST00000449661 238 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 snoU13.30-201ENST00000458951 104 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC015911.1-201ENST00000495111 156 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 RNU6-911P-201ENST00000516523 104 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 RNU6-1198P-201ENST00000516904 67 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 MIR2355-201ENST00000517199 87 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC107016.2-201ENST00000547968 190 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 RPL23AP88-201ENST00000605759 454 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
VTA1Q9NP79 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
VTA1Q9NP79 AC096644.4-201ENST00000563417 2912 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms