Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RN7SL303P-201ENST00000469773 251 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.8□□□□□ -1.8
SSU72Q9NP77 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNU5F-8P-201ENST00000515941 111 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNA5SP179-201ENST00000517284 121 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 HMGN2P15-201ENST00000585707 270 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNU2-4P-201ENST00000606190 192 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.15-201ENST00000611544 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.16-201ENST00000613119 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.12-201ENST00000613778 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.9-201ENST00000615427 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.11-201ENST00000616345 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.2-201ENST00000616535 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.3-201ENST00000617785 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.19-201ENST00000618602 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNU2-1-201ENST00000618664 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.6-201ENST00000619225 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.5-201ENST00000619465 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 U2.10-201ENST00000620268 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 MIR7703-201ENST00000620784 77 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 MIR3653-201ENST00000625572 110 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.8□□□□□ -1.8
SSU72Q9NP77 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSU72Q9NP77 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSU72Q9NP77 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 Y_RNA.7-201ENST00000362352 102 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 Y_RNA.329-201ENST00000365209 107 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RNU6-22P-201ENST00000384355 107 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 MIR184-201ENST00000384962 84 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 U3.26-201ENST00000391236 204 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RN7SKP177-201ENST00000410567 355 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RN7SKP53-201ENST00000411337 315 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AC096649.2-201ENST00000416186 393 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 AL590762.4-201ENST00000425885 253 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 AL135790.2-201ENST00000437701 267 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 UQCRHP4-201ENST00000471686 272 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AC091167.1-201ENST00000492017 396 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RAC1P2-201ENST00000511164 579 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RNU5F-2P-201ENST00000516066 82 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RNU6-436P-201ENST00000516171 114 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 RNU2-12P-201ENST00000517216 168 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AC011602.1-201ENST00000546484 331 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 CYP4A27P-201ENST00000567218 190 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 AC068831.7-201ENST00000616954 363 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 MTND1P7-201ENST00000632801 297 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 SNORD98-201ENST00000636377 67 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 MIR3674-201ENST00000636576 68 ntBASIC3.79□□□□□ -1.8
SSU72Q9NP77 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSU72Q9NP77 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.79□□□□□ -1.8
SSU72Q9NP77 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSU72Q9NP77 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSU72Q9NP77 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU1-62P-201ENST00000362599 164 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU6-1290P-201ENST00000362957 109 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU5F-3P-201ENST00000363767 117 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU4-84P-201ENST00000364200 139 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU6-312P-201ENST00000364629 107 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 Y_RNA.400-201ENST00000383963 111 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU6-1027P-201ENST00000383998 107 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 Y_RNA.497-201ENST00000384447 98 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RNU2-51P-201ENST00000410708 197 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC004866.1-201ENST00000411748 78 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AL162725.1-201ENST00000435405 301 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 U8.19-201ENST00000459095 133 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC103975.1-201ENST00000482506 483 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 AIG1P1-201ENST00000503376 148 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC006445.2-201ENST00000510061 472 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC023141.12-201ENST00000512399 199 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 IGKV2D-19-201ENST00000523346 262 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AL356575.1-201ENST00000603008 283 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 HSPE1P7-201ENST00000604681 321 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC023043.4-201ENST00000612081 449 ntBASIC3.78□□□□□ -1.8
SSU72Q9NP77 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSU72Q9NP77 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.78□□□□□ -1.8
SSU72Q9NP77 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSU72Q9NP77 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SSU72Q9NP77 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSU72Q9NP77 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SSU72Q9NP77 Y_RNA.75-201ENST00000362927 97 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 RNU6-801P-201ENST00000364087 105 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 RNA5SP509-201ENST00000364577 119 ntBASIC3.77□□□□□ -1.81
SSU72Q9NP77 CBX3P9-201ENST00000402326 552 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms