Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.99□□□□□ -1.93
USP29Q9HBJ7 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 MTND4P19-201ENST00000446659 478 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AL031659.1-201ENST00000447075 539 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 MED28P2-201ENST00000475771 317 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 ACA59.2-201ENST00000517061 156 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AC010186.2-204ENST00000537668 439 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AC009163.5-201ENST00000575421 637 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AC091152.3-201ENST00000604227 325 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AC016925.2-201ENST00000605108 242 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.99□□□□□ -1.93
USP29Q9HBJ7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP29Q9HBJ7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
USP29Q9HBJ7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC099654.7-201ENST00000635788 2127 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 MTND5P9-201ENST00000503854 1755 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 RNU6-843P-201ENST00000384454 104 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AL590004.2-201ENST00000404787 371 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 NUP35P1-201ENST00000422734 947 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AL591043.1-201ENST00000432461 424 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AL161651.1-201ENST00000440882 223 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 RPL17P19-201ENST00000489069 552 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 MIR5701-3-201ENST00000578890 82 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 MIR5701-1-201ENST00000585138 82 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AL033523.1-201ENST00000605153 153 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC116312.1-201ENST00000606841 314 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC107871.2-201ENST00000612894 502 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 MIR5701-2-201ENST00000615634 82 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 AC007485.1-201ENST00000616755 206 ntBASIC2.98□□□□□ -1.93
USP29Q9HBJ7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP29Q9HBJ7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 SNORD56.1-201ENST00000362913 68 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNU6-595P-201ENST00000363944 107 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 SNORD32A-201ENST00000364805 84 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 Y_RNA.422-201ENST00000384054 114 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNU6-1160P-201ENST00000384546 104 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 MTND2P23-201ENST00000422990 651 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RPL23AP50-201ENST00000434149 455 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 HMGN1P10-201ENST00000474557 553 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNA5SP367-201ENST00000516557 118 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 SNORD19.2-201ENST00000516978 73 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNU6-1137P-201ENST00000517073 99 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 RNU6-988P-201ENST00000519081 107 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 MIR3162-201ENST00000581818 82 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 MIR3124-201ENST00000582636 67 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 MIR4672-201ENST00000583126 81 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 HMGB1P24-202ENST00000615653 685 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 ZNF299P-201ENST00000406845 1804 ntBASIC2.97□□□□□ -1.93
USP29Q9HBJ7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP29Q9HBJ7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.96□□□□□ -1.94
USP29Q9HBJ7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP29Q9HBJ7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP29Q9HBJ7 RNY1P16-201ENST00000363063 111 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 RNU6-622P-201ENST00000384272 103 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 MIR181A2-201ENST00000384863 110 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AL139132.1-201ENST00000431587 344 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AL353997.1-201ENST00000432936 108 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.96□□□□□ -1.94
USP29Q9HBJ7 RNU6-327P-201ENST00000516270 127 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 RNU6-264P-201ENST00000517134 104 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AC025281.1-201ENST00000567026 265 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AC006504.6-201ENST00000590142 199 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AL355802.3-201ENST00000607571 545 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 AC083806.3-201ENST00000614016 455 ntBASIC2.96□□□□□ -1.94
USP29Q9HBJ7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
USP29Q9HBJ7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms