Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.56□□□□□ -2
BRF2Q9HAW0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 NCOR1P3-201ENST00000420479 303 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.56□□□□□ -2
BRF2Q9HAW0 AL133396.1-201ENST00000432048 687 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 HMGB1P18-201ENST00000438801 619 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 RN7SKP24-201ENST00000515888 284 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.56□□□□□ -2
BRF2Q9HAW0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.56□□□□□ -2
BRF2Q9HAW0 AC016256.1-201ENST00000547971 354 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 UBE2V2P2-201ENST00000587677 504 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.56□□□□□ -2
BRF2Q9HAW0 AL034555.1-201ENST00000604816 211 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 AL355073.2-201ENST00000612106 557 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 TPTEP1-208ENST00000636884 213 ntBASIC2.56□□□□□ -2
BRF2Q9HAW0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
BRF2Q9HAW0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
BRF2Q9HAW0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
BRF2Q9HAW0 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 SNORA26.3-201ENST00000391119 136 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 RPS3AP52-201ENST00000435639 297 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 RPS3AP12-201ENST00000443616 753 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 MTND4P12-201ENST00000498999 1377 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 HMGB1P35-201ENST00000503360 598 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 MTND5P5-201ENST00000503764 376 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 AC091874.1-201ENST00000511402 339 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 SNORA70.24-201ENST00000517233 118 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.55□□□□□ -2
BRF2Q9HAW0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
BRF2Q9HAW0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.55□□□□□ -2
BRF2Q9HAW0 AC021231.3-201ENST00000558497 370 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 CPDP1-201ENST00000579660 283 ntBASIC2.55□□□□□ -2
BRF2Q9HAW0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BRF2Q9HAW0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
BRF2Q9HAW0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BRF2Q9HAW0 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 Y_RNA.184-201ENST00000363884 108 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 Y_RNA.303-201ENST00000364998 94 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 SNORD81.2-201ENST00000365153 76 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 RN7SKP158-201ENST00000410453 326 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 RPL37P10-201ENST00000412884 288 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 PDCL2P1-201ENST00000419302 352 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 MTND5P20-201ENST00000448677 143 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
BRF2Q9HAW0 Y_RNA.702-201ENST00000516843 96 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.54□□□□□ -2
BRF2Q9HAW0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.54□□□□□ -2
BRF2Q9HAW0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
BRF2Q9HAW0 AC078795.3-201ENST00000602913 472 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 AL161756.2-201ENST00000604597 246 ntBASIC2.54□□□□□ -2
BRF2Q9HAW0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
BRF2Q9HAW0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.53□□□□□ -2
BRF2Q9HAW0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.53□□□□□ -2
BRF2Q9HAW0 MIR548K-201ENST00000408406 116 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 MTND4P18-201ENST00000447010 465 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.53□□□□□ -2
BRF2Q9HAW0 AL353752.1-201ENST00000454946 260 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 RPS29P27-201ENST00000463711 170 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.53□□□□□ -2
BRF2Q9HAW0 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.53□□□□□ -2
BRF2Q9HAW0 PTP4A1P4-201ENST00000512479 322 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.53□□□□□ -2
BRF2Q9HAW0 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.53□□□□□ -2
BRF2Q9HAW0 MIR4273-201ENST00000582824 84 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 AC063943.3-201ENST00000615562 356 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.53□□□□□ -2
BRF2Q9HAW0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.53□□□□□ -2
BRF2Q9HAW0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.53□□□□□ -2
BRF2Q9HAW0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
BRF2Q9HAW0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BRF2Q9HAW0 AC080100.1-201ENST00000624239 5356 ntBASIC2.53□□□□□ -2.01
BRF2Q9HAW0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC069528.2-201ENST00000624849 1991 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 Y_RNA.142-201ENST00000363491 102 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 RNY3P14-201ENST00000384309 102 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 HMGB3P2-201ENST00000411913 584 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC105272.1-201ENST00000438604 198 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC107083.1-201ENST00000439643 279 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC011816.1-201ENST00000441346 546 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC093019.1-201ENST00000443135 252 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms