Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 FTX_3.1-201ENST00000610451 147 ntBASIC3.69□□□□□ -1.82
BCAS3Q9H6U6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.69□□□□□ -1.82
BCAS3Q9H6U6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 SNORD32A-201ENST00000364805 84 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 RNU6-140P-201ENST00000384566 108 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 Y_RNA.793-201ENST00000411222 111 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC005002.2-201ENST00000438228 269 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC243964.1-201ENST00000441814 261 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AL031659.1-201ENST00000447075 539 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 UBE2DNL-203ENST00000474922 222 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 RPL30P1-201ENST00000488676 339 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC006445.1-201ENST00000491925 405 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC078817.1-201ENST00000492623 435 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC078918.1-201ENST00000498515 228 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC023141.12-201ENST00000512399 199 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 MIR2682-201ENST00000580305 110 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 AC073657.2-201ENST00000605661 303 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 SNORD113-5-201ENST00000607261 78 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 U6.99-201ENST00000637524 83 ntBASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BCAS3Q9H6U6 RNU6-222P-201ENST00000362438 107 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 RNU5B-2P-201ENST00000363036 113 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 Y_RNA.199-201ENST00000364014 102 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 RPS4XP3-201ENST00000398541 413 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AC126124.2-201ENST00000413542 321 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 RPS15AP7-201ENST00000439294 405 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AC096638.1-201ENST00000444678 216 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AF186996.7-201ENST00000492781 209 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 RN7SKP49-201ENST00000516675 260 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 AC011602.1-201ENST00000546484 331 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 CR383656.8-201ENST00000549046 145 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 MIR3910-1-201ENST00000580936 111 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 Z83818.1-201ENST00000603584 150 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 MIR6134-201ENST00000617606 109 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 SRP72P2-201ENST00000344851 1979 ntBASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
BCAS3Q9H6U6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 FTLP6-201ENST00000355274 422 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 Y_RNA.44-201ENST00000362676 108 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 Y_RNA.76-201ENST00000362931 109 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 SNORD115-8-201ENST00000363856 82 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 SNORD115-38-201ENST00000365037 82 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 RNY4P28-201ENST00000365281 93 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 U3.15-201ENST00000365398 212 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AL033519.2-201ENST00000403958 392 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 Y_RNA.602-201ENST00000410535 92 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 RNU5A-5P-201ENST00000411054 116 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AL353705.4-201ENST00000449661 238 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 RPL23AP14-201ENST00000468281 468 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AC021205.2-201ENST00000480069 347 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 RPL26P26-201ENST00000480251 434 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AC097462.2-201ENST00000504623 481 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 SCARNA24.2-201ENST00000516968 130 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 TGIF1P1-201ENST00000558095 802 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 MIR5571-201ENST00000577998 113 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 MIR4282-201ENST00000583613 67 ntBASIC3.66□□□□□ -1.82
BCAS3Q9H6U6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BCAS3Q9H6U6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
BCAS3Q9H6U6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
BCAS3Q9H6U6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BCAS3Q9H6U6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
BCAS3Q9H6U6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
BCAS3Q9H6U6 MIR423-201ENST00000362201 94 ntBASIC3.65□□□□□ -1.83
BCAS3Q9H6U6 RNU6-527P-201ENST00000363425 104 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms