Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.33-201ENST00000362591 102 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RNA5SP126-201ENST00000365092 109 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 U8.9-201ENST00000365667 134 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RNU6-301P-201ENST00000384277 107 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.477-201ENST00000384352 108 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RNU6-325P-201ENST00000411132 105 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 YPEL5P1-201ENST00000419731 367 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 HMGN2P13-201ENST00000476476 274 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RN7SL429P-201ENST00000479090 223 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RN7SL489P-201ENST00000486185 223 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RN7SL327P-201ENST00000488659 223 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC069113.1-201ENST00000517763 267 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC079600.2-201ENST00000550076 130 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 TRAV28-201ENST00000557548 323 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC090517.1-201ENST00000569307 266 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 MIR1244-1-201ENST00000612829 85 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 RN7SL853P-201ENST00000617250 223 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 MIR1244-3-201ENST00000635744 85 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 MIR1244-2-201ENST00000636449 85 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 MIR1244-4-202ENST00000636813 85 ntBASIC2.98□□□□□ -1.93
EBF3Q9H4W6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
EBF3Q9H4W6 AC007785.2-201ENST00000598627 1916 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 FTLP6-201ENST00000355274 422 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.14-201ENST00000362415 103 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 RNY1P16-201ENST00000363063 111 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.152-201ENST00000363578 100 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.276-201ENST00000364732 109 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.552-201ENST00000384665 112 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.562-201ENST00000384695 113 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 SAR1AP2-201ENST00000392696 594 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AL590004.2-201ENST00000404787 371 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AL591034.1-201ENST00000407447 340 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 RNA5SP274-201ENST00000410484 108 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 MYL8P-204ENST00000431574 518 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AL109933.2-201ENST00000452651 260 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 RNU6-397P-201ENST00000516226 104 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 RNA5SP290-201ENST00000517133 127 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AC006600.1-201ENST00000572529 153 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 CPDP1-201ENST00000579660 283 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 OR1M4P-201ENST00000589199 287 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AC004805.2-201ENST00000605382 482 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 MIR3976-201ENST00000606807 139 ntBASIC2.97□□□□□ -1.93
EBF3Q9H4W6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
EBF3Q9H4W6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
EBF3Q9H4W6 AC096644.4-201ENST00000563417 2912 ntBASIC2.96□□□□□ -1.93
EBF3Q9H4W6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
EBF3Q9H4W6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.533-201ENST00000384596 114 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 RNU6-713P-201ENST00000384761 107 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 RNU4-61P-201ENST00000411243 107 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC092047.1-201ENST00000424997 240 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC007919.1-201ENST00000429380 217 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 Z82210.1-201ENST00000440037 231 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 RPL39P40-201ENST00000445481 146 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AL590664.1-201ENST00000448065 339 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 FCF1P4-201ENST00000448326 183 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 RNU7-169P-201ENST00000459456 61 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC093852.1-201ENST00000503587 266 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 SNORA25.11-201ENST00000515935 105 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 HSPE1P20-201ENST00000538133 289 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AL133393.1-201ENST00000603277 287 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AL121917.1-203ENST00000605534 577 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC096772.1-201ENST00000609146 564 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 AC141273.2-201ENST00000618989 130 ntBASIC2.96□□□□□ -1.94
EBF3Q9H4W6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
EBF3Q9H4W6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC090740.1-201ENST00000623193 2262 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 MIR412-201ENST00000362142 91 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.19-201ENST00000362462 99 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms