Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
VCX3BQ9H321 AC009033.1-201ENST00000624279 431 ntBASIC0.8□□□□□ -2.28
VCX3BQ9H321 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
VCX3BQ9H321 RNU6-142P-201ENST00000384019 107 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 SNORA12.2-201ENST00000391040 156 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 RNU6-387P-201ENST00000411331 105 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 MTCO3P41-201ENST00000414801 328 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 C8orf59P1-201ENST00000429930 303 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC099677.2-201ENST00000436385 175 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 HSPE1P9-201ENST00000440046 311 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 OR2AQ1P-201ENST00000451972 200 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 SNORD60.2-201ENST00000516883 86 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 RNU6-1220P-201ENST00000517126 108 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.79□□□□□ -2.28
VCX3BQ9H321 MIR3136-201ENST00000583498 78 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC012507.3-201ENST00000603556 477 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AL451064.1-201ENST00000607718 471 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AL512598.1-201ENST00000610158 273 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 AL353770.2-201ENST00000620024 78 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.79□□□□□ -2.28
VCX3BQ9H321 MTND5P35-201ENST00000557537 1720 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 RNU6-501P-201ENST00000364072 100 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 SNORA32.2-201ENST00000384049 122 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 MIR520A-201ENST00000384862 85 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 RNU6-360P-201ENST00000390944 104 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 MRPL42P2-201ENST00000403169 426 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 MTCYBP2-201ENST00000407745 171 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 RNU6-1245P-201ENST00000411130 106 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AL161935.2-201ENST00000414627 60 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 CYCSP49-201ENST00000420810 319 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC243964.1-201ENST00000441814 261 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 SNRPEP8-201ENST00000442866 260 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 RPS27P1-201ENST00000450552 247 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 RN7SKP210-201ENST00000459176 261 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.78□□□□□ -2.28
VCX3BQ9H321 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.78□□□□□ -2.28
VCX3BQ9H321 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
VCX3BQ9H321 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AP001893.2-201ENST00000526949 202 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.78□□□□□ -2.28
VCX3BQ9H321 HMGB1P33-201ENST00000563485 527 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 MIR4999-201ENST00000585029 91 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AP003465.2-201ENST00000602571 373 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC008945.2-201ENST00000606056 604 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC138749.5-201ENST00000611461 208 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 AC116165.2-201ENST00000616705 206 ntBASIC0.78□□□□□ -2.28
VCX3BQ9H321 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 RNU6-179P-201ENST00000363350 107 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 RNU6-1141P-201ENST00000364520 107 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 RNU6-43P-201ENST00000384302 107 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 MIR620-201ENST00000385232 95 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 RNA5SP201-201ENST00000410316 124 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 MTCO2P23-201ENST00000425216 680 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 AL606662.1-201ENST00000445763 553 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC009474.2-201ENST00000451383 136 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 snoU13.30-201ENST00000458951 104 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 RNA5SP269-201ENST00000459032 137 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 HMGN2P9-201ENST00000476875 229 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 AF131216.2-201ENST00000512316 564 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 MTCO3P28-201ENST00000513351 515 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 SNORA31.16-201ENST00000516773 139 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC022616.3-201ENST00000523940 148 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC087883.1-201ENST00000551882 391 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 PCMTD1P2-201ENST00000565017 355 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC015688.6-201ENST00000577737 104 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 MIR4303-201ENST00000581299 66 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 VN1R80P-201ENST00000597126 338 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC090578.1-201ENST00000604955 591 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AL121992.2-201ENST00000606262 256 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 AC099654.13-201ENST00000639774 207 ntBASIC0.77□□□□□ -2.29
VCX3BQ9H321 Y_RNA.111-201ENST00000363248 100 ntBASIC0.76□□□□□ -2.29
VCX3BQ9H321 SNORA7.1-201ENST00000363750 139 ntBASIC0.76□□□□□ -2.29
VCX3BQ9H321 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.76□□□□□ -2.29
VCX3BQ9H321 RNU6-692P-201ENST00000384496 107 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms