Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VPS11Q9H270 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS11Q9H270 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS11Q9H270 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS11Q9H270 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VPS11Q9H270 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS11Q9H270 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VPS11Q9H270 RNU6-799P-201ENST00000363567 107 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 Y_RNA.233-201ENST00000364407 101 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 U3.13-201ENST00000364804 214 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 Y_RNA.286-201ENST00000364813 102 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 Y_RNA.304-201ENST00000365011 112 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 RNU6-658P-201ENST00000384606 106 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 RNU6-959P-201ENST00000384671 107 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 SNORA12.2-201ENST00000391040 156 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS11Q9H270 RN7SKP156-201ENST00000410308 342 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 BPY2DP-201ENST00000422208 265 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 AL365496.1-201ENST00000426885 215 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS11Q9H270 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS11Q9H270 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS11Q9H270 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS11Q9H270 MIR4782-201ENST00000577987 79 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 MIR4286-201ENST00000580651 93 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 AL020997.2-201ENST00000602607 184 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 MIR8076-201ENST00000611401 83 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 AC011476.5-201ENST00000615594 130 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS11Q9H270 AC110491.1-201ENST00000562191 2010 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 AC110774.1-201ENST00000623567 2018 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 AC007496.3-201ENST00000624987 3443 ntBASIC3.52□□□□□ -1.85
VPS11Q9H270 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS11Q9H270 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS11Q9H270 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 RNU6-384P-201ENST00000364900 104 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 Y_RNA.504-201ENST00000384481 104 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 RNU6-1179P-201ENST00000384667 107 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 RPL19P1-201ENST00000411635 428 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS11Q9H270 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 AC007560.1-201ENST00000426912 237 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 RPS29P7-201ENST00000439662 171 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 AL078601.1-201ENST00000444542 271 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 AC087477.1-201ENST00000465747 340 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 PHBP14-201ENST00000512887 367 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 AL590705.4-201ENST00000532209 134 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 MIR3160-1-201ENST00000577972 85 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS11Q9H270 Y_RNA.772-201ENST00000606692 102 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS11Q9H270 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS11Q9H270 AC091564.4-201ENST00000533934 2194 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 AC103988.1-201ENST00000566382 2177 ntBASIC3.51□□□□□ -1.85
VPS11Q9H270 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS11Q9H270 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS11Q9H270 MFSD8-233ENST00000641482 4860 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS11Q9H270 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS11Q9H270 Y_RNA.405-201ENST00000383979 100 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 Y_RNA.451-201ENST00000384200 100 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 RNU6-166P-201ENST00000384371 107 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 Y_RNA.524-201ENST00000384564 100 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 Y_RNA.561-201ENST00000384694 100 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS11Q9H270 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS11Q9H270 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS11Q9H270 SNORA53-201ENST00000391141 249 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 BMS1P22-201ENST00000414726 313 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AL096701.2-201ENST00000416920 238 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC245291.1-201ENST00000419501 328 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS11Q9H270 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS11Q9H270 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS11Q9H270 AC125238.1-201ENST00000448842 249 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 HMGN1P18-201ENST00000457642 277 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 CENPBD1P1-201ENST00000464061 469 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS11Q9H270 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS11Q9H270 RNU6-1219P-201ENST00000516143 112 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 RNU6-1183P-201ENST00000517054 60 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC104027.1-201ENST00000521887 300 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 TRAV37-201ENST00000553906 342 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 RN7SL703P-201ENST00000578485 302 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 MIR4282-201ENST00000583613 67 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS11Q9H270 AL162424.1-201ENST00000602325 221 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AP003355.3-201ENST00000623465 114 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC097372.5-201ENST00000623665 376 ntBASIC3.5□□□□□ -1.85
VPS11Q9H270 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS11Q9H270 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS11Q9H270 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS11Q9H270 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms