Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC099654.7-201ENST00000635788 2127 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 AF127577.6-201ENST00000623352 2191 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNA5SP366-201ENST00000365454 123 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 Y_RNA.572-201ENST00000384757 98 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 SNORA26.5-201ENST00000391215 123 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RN7SKP53-201ENST00000411337 315 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RHEBP3-201ENST00000411920 351 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNA5SP246-201ENST00000458909 119 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 AC091179.3-201ENST00000474761 144 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RN7SL691P-201ENST00000494487 301 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 FCF1P8-201ENST00000510322 597 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 SCARNA8-201ENST00000515924 131 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-436P-201ENST00000516171 114 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNA5SP49-201ENST00000516450 115 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-589P-201ENST00000516485 107 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-453P-201ENST00000516819 85 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 CYCSP29-201ENST00000533731 318 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 MIR4458-201ENST00000578872 75 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 AC053481.4-201ENST00000583164 216 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 AP001340.1-201ENST00000624405 217 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 MIR3674-201ENST00000636576 68 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NUCKS1Q9H1E3 AC004925.1-201ENST00000624256 2706 ntBASIC4.46□□□□□ -1.69
NUCKS1Q9H1E3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NUCKS1Q9H1E3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 SNORA70.2-201ENST00000364506 135 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-1141P-201ENST00000364520 107 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 Y_RNA.309-201ENST00000365046 111 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 SNORA22-201ENST00000383907 134 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-147P-201ENST00000383983 107 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-793P-201ENST00000384233 104 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 SNORA8.3-201ENST00000384679 139 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 MIR544A-201ENST00000384855 91 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 RN7SKP61-201ENST00000410642 295 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 RPS26P42-201ENST00000413485 326 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AC091167.1-201ENST00000492017 396 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 RNU2-56P-201ENST00000516826 190 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AP004371.1-201ENST00000525240 214 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AP001328.1-201ENST00000528550 176 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 IPO5P1-202ENST00000600039 287 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 MIR6798-201ENST00000612887 67 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 MIR6716-201ENST00000613413 80 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AL445567.2-201ENST00000618935 498 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AL354798.1-201ENST00000622505 329 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AL773545.4-201ENST00000637262 310 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 AL513478.4-201ENST00000641636 310 ntBASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.46□□□□□ -1.7
NUCKS1Q9H1E3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-407P-201ENST00000365280 104 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 U3.40-201ENST00000408706 208 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RPL26P27-201ENST00000414397 437 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC096649.2-201ENST00000416186 393 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC074117.2-201ENST00000417130 397 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 UQCRHP4-201ENST00000471686 272 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC105137.1-201ENST00000484355 562 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RPL31P61-201ENST00000496160 376 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RNA5SP519-201ENST00000516480 119 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-1007P-201ENST00000516586 107 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RNU7-143P-201ENST00000516781 65 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 Y_RNA.712-201ENST00000517011 92 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 RNU2-12P-201ENST00000517216 168 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC136628.3-201ENST00000521868 290 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC021231.3-201ENST00000558497 370 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC023043.3-201ENST00000593113 385 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC005255.1-201ENST00000593748 216 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AL391813.1-201ENST00000603098 260 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 U7.2-201ENST00000607576 63 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AP002826.1-201ENST00000608835 315 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC006065.5-201ENST00000623427 349 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 MIR3653-201ENST00000625572 110 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 AC134026.1-201ENST00000623249 2239 ntBASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUCKS1Q9H1E3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms