Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SCARNA4-201ENST00000629045 128 ntBASIC3.05□□□□□ -1.92
TRIM54Q9BYV2 SNORA43.4-201ENST00000629559 138 ntBASIC3.05□□□□□ -1.92
TRIM54Q9BYV2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM54Q9BYV2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM54Q9BYV2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM54Q9BYV2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TRIM54Q9BYV2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 Z75746.1-201ENST00000440243 2080 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 Y_RNA.28-201ENST00000362554 111 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 Y_RNA.31-201ENST00000362574 102 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 Y_RNA.132-201ENST00000363421 102 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 Y_RNA.314-201ENST00000365114 102 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 SNORA7.4-201ENST00000384249 137 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RNU1-57P-201ENST00000384491 166 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AL138885.1-201ENST00000405921 675 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RNU6-1156P-201ENST00000410365 100 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RNA5SP494-201ENST00000410653 129 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC097463.2-201ENST00000421074 142 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AL590135.1-201ENST00000422215 156 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 PMCHL1-202ENST00000423102 261 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC019205.3-201ENST00000424573 156 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC008267.5-201ENST00000424928 265 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC092423.1-201ENST00000430165 186 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC009296.1-201ENST00000443146 155 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC016700.2-201ENST00000446011 156 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RN7SL807P-201ENST00000470923 297 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC015911.1-201ENST00000495111 156 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AIG1P1-201ENST00000503376 148 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC021146.2-201ENST00000504736 556 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 SNORA25.11-201ENST00000515935 105 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RN7SKP43-201ENST00000516173 320 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RNU6-567P-201ENST00000516746 107 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 RNU7-4P-201ENST00000516961 62 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 ANP32BP3-201ENST00000559213 706 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 MIR5571-201ENST00000577998 113 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 MIR5701-3-201ENST00000578890 82 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 MIR3136-201ENST00000583498 78 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 MIR5701-1-201ENST00000585138 82 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC100812.1-201ENST00000607622 580 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 MIR5701-2-201ENST00000615634 82 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 AC091953.5-201ENST00000622919 233 ntBASIC3.04□□□□□ -1.92
TRIM54Q9BYV2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 OR56A5-201ENST00000340110 738 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 SNORA29-201ENST00000384183 140 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 MIR186-201ENST00000384988 86 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 MIR34B-201ENST00000385076 84 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 RN7SKP58-201ENST00000411010 305 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 BMS1P22-201ENST00000414726 313 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 snoU13.30-201ENST00000458951 104 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 snoU13.14-201ENST00000459372 104 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 RPL30P1-201ENST00000488676 339 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 RPL23AP75-201ENST00000491601 451 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AC105758.1-201ENST00000506038 399 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AC074250.1-201ENST00000511117 192 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 Y_RNA.706-201ENST00000516933 99 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AC104581.2-201ENST00000572227 430 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 RPL23AP88-201ENST00000605759 454 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AC006157.1-201ENST00000611750 366 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 AC137590.2-201ENST00000619709 240 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 SNORD98-201ENST00000636377 67 ntBASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRIM54Q9BYV2 RNU6-655P-201ENST00000362858 107 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 RNU6-529P-201ENST00000363383 104 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 RNU1-115P-201ENST00000365329 160 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC117470.1-201ENST00000381974 330 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 SNORA22B-201ENST00000383876 138 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.422-201ENST00000384054 114 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MIR634-201ENST00000385208 97 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 SNORA12.2-201ENST00000391040 156 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 SNORA26.3-201ENST00000391119 136 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MCFD2P1-201ENST00000417812 300 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MRPS18CP6-201ENST00000423587 223 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 Z75741.1-201ENST00000446793 314 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC087477.1-201ENST00000465747 340 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC090525.1-201ENST00000479116 478 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 RN7SKP272-201ENST00000516988 232 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC103810.1-201ENST00000579873 453 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AC016925.2-201ENST00000605108 242 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MIR1244-1-201ENST00000612829 85 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MIR1244-3-201ENST00000635744 85 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MIR1244-2-201ENST00000636449 85 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 MIR1244-4-202ENST00000636813 85 ntBASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM54Q9BYV2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms