Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AC010332.2-201ENST00000613083 1904 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 MTND5P35-201ENST00000557537 1720 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.179-201ENST00000363844 90 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 SNORA62.3-201ENST00000365110 153 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 RNU6-215P-201ENST00000365169 102 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 RNU6-239P-201ENST00000390990 99 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 SNORA3.3-201ENST00000408712 125 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC092047.1-201ENST00000424997 240 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC078809.1-201ENST00000427601 140 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 CR769767.1-201ENST00000436337 346 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC007969.2-201ENST00000441891 191 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AL121594.1-201ENST00000475906 575 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 RNU6-155P-201ENST00000516347 100 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC021231.3-201ENST00000558497 370 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AL360157.1-201ENST00000565962 87 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 MIR1254-2-201ENST00000579553 63 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC006130.2-201ENST00000586202 326 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AL008718.3-201ENST00000610217 321 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 AC092628.2-201ENST00000622492 339 ntBASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP3Q9BWW4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC092268.1-201ENST00000342691 405 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 RNU1-89P-201ENST00000384592 164 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 MIR30B-201ENST00000384850 88 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 MIR569-201ENST00000385228 96 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 SNORA11-201ENST00000408789 128 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 RN7SKP156-201ENST00000410308 342 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 RN7SKP61-201ENST00000410642 295 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC083863.1-201ENST00000438811 231 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC125238.1-201ENST00000448842 249 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC012308.1-201ENST00000451232 178 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 SNORA70.14-201ENST00000516205 110 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC034105.4-201ENST00000568304 277 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 AC009127.3-201ENST00000570531 403 ntBASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SSBP3Q9BWW4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 SRP72P2-201ENST00000344851 1979 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RNA5SP322-201ENST00000363617 119 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 MIR325-201ENST00000385260 98 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AL512633.1-201ENST00000399931 655 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RNA5SP475-201ENST00000410568 110 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RPL26P27-201ENST00000414397 437 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 TOMM22P1-201ENST00000418578 312 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AL035461.1-201ENST00000421490 332 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 HMGN2P30-201ENST00000423237 256 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RAB28P5-201ENST00000427490 651 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC244670.1-201ENST00000436879 112 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RN7SL542P-201ENST00000467147 294 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RNA5SP272-201ENST00000516095 111 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RNA5SP164-201ENST00000516533 110 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 RNU6-919P-201ENST00000516731 104 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 DEFB117-201ENST00000602356 141 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AL359198.2-201ENST00000611836 194 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC091932.3-201ENST00000624223 323 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC106871.1-201ENST00000568324 3102 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 FAM35DP-201ENST00000323387 2712 ntBASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.22□□□□□ -1.89
SSBP3Q9BWW4 AC099654.7-201ENST00000635788 2127 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms