Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MTCO1P29-201ENST00000496868 288 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 HMGN1P12-201ENST00000499125 195 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AC097462.2-201ENST00000504623 481 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AC008526.1-201ENST00000509149 338 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AC096745.1-201ENST00000509945 370 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AC092436.3-201ENST00000511788 257 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AC109329.1-201ENST00000518744 317 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 ELOCP5-201ENST00000604924 333 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AC024581.2-201ENST00000619986 252 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 RBBP8P1-201ENST00000449447 1844 ntBASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC28BQ9BUN5 AL359854.1-201ENST00000614203 1594 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 SNORD46.1-201ENST00000364139 104 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-336P-201ENST00000364891 107 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 RNA5SP184-201ENST00000411071 108 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-1245P-201ENST00000411130 106 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AL030996.1-201ENST00000411430 235 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 MICF-203ENST00000432679 129 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC007969.2-201ENST00000441891 191 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 GPM6BP3-201ENST00000442797 145 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 MTND5P20-201ENST00000448677 143 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AP001324.2-201ENST00000461163 319 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AP001025.1-201ENST00000486139 332 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC018437.1-201ENST00000492214 406 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 RPL22P13-201ENST00000493291 347 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AK3P2-201ENST00000507976 429 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 SNORA31.6-201ENST00000516241 130 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-566P-201ENST00000516790 107 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC134698.4-201ENST00000523451 826 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 SCOCP1-201ENST00000554676 349 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC026464.5-201ENST00000562497 722 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 MIR4319-201ENST00000577285 85 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC090897.2-201ENST00000581715 130 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC005730.3-201ENST00000583067 366 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 UBE2V2P2-201ENST00000587677 504 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 BNIP3P22-201ENST00000593399 556 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AL356157.2-201ENST00000605122 111 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC064836.2-201ENST00000609491 462 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 uc_338.5-201ENST00000611839 155 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AL355073.2-201ENST00000612106 557 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AL449363.1-201ENST00000617815 186 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC092794.2-201ENST00000620933 563 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AL008636.1-201ENST00000625038 1018 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 AC131280.1-202ENST00000624067 4211 ntBASIC2.11□□□□□ -2.07
CCDC28BQ9BUN5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-1010P-201ENST00000362757 107 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 SNORD56.1-201ENST00000362913 68 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-428P-201ENST00000362942 107 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AL139396.1-201ENST00000421137 167 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 NUP35P1-201ENST00000422734 947 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 MTND4P18-201ENST00000447010 465 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RN7SL636P-201ENST00000497504 294 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RNA5SP112-201ENST00000515937 99 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RNU7-30P-201ENST00000516835 62 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-1088P-201ENST00000516850 104 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 RNA5SP454-201ENST00000517231 127 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AC079598.5-201ENST00000547460 117 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AC005668.1-201ENST00000571142 476 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AL160281.1-201ENST00000605307 311 ntBASIC2.1□□□□□ -2.07
CCDC28BQ9BUN5 AC002543.1-201ENST00000299783 1954 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 RNU6-293P-201ENST00000411259 106 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 FABP5P14-201ENST00000437273 393 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AMD1P1-201ENST00000457220 922 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 U8.21-201ENST00000459536 136 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AC130509.1-201ENST00000464158 433 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AC114801.2-201ENST00000503825 781 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 SMURF2P1-201ENST00000514992 481 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 Y_RNA.702-201ENST00000516843 96 ntBASIC2.09□□□□□ -2.07
CCDC28BQ9BUN5 AC104576.1-201ENST00000524225 88 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms