Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 AC008155.2-201ENST00000464337 397 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 RPS26P21-201ENST00000475397 348 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 AC093663.1-201ENST00000497190 394 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 HMGB3P17-201ENST00000504195 649 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 RNU5F-8P-201ENST00000515941 111 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 SCARNA13-201ENST00000516672 275 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 ACA59.2-201ENST00000517061 156 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 AC026333.2-201ENST00000542164 106 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 AC093023.1-201ENST00000547375 507 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 AC136932.1-201ENST00000574771 208 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
NDC1Q9BTX1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NDC1Q9BTX1 HAUS6P2-201ENST00000433254 2404 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC004944.1-201ENST00000517807 3059 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.143-201ENST00000363520 106 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 SNORD32A-201ENST00000364805 84 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RNU1-140P-201ENST00000365040 165 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RNU6-17P-201ENST00000384245 107 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RNU6-843P-201ENST00000384454 104 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RNU6-18P-201ENST00000384527 107 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 MIR32-201ENST00000384965 70 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 SNORD115-46-201ENST00000390982 71 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 BX679664.1-201ENST00000434429 253 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AL161651.1-201ENST00000440882 223 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC007969.2-201ENST00000441891 191 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RNU7-23P-201ENST00000459465 62 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.713-201ENST00000517013 96 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 SNORA31.23-201ENST00000517219 133 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 RN7SKP57-201ENST00000517248 293 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC022868.1-201ENST00000517767 391 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 MIR4300-201ENST00000581016 96 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 MIR4276-201ENST00000584832 70 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC012531.5-201ENST00000611375 151 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 MIR376A1-201ENST00000616574 68 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
NDC1Q9BTX1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.24□□□□□ -1.89
NDC1Q9BTX1 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 RNU6-1301P-201ENST00000362724 104 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.237-201ENST00000364439 102 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.478-201ENST00000384358 107 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.515-201ENST00000384535 112 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 MIR544A-201ENST00000384855 91 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC096920.1-201ENST00000423991 241 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AF186996.7-201ENST00000492781 209 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 RNU6-1012P-201ENST00000516606 109 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 RNU6-111P-201ENST00000517179 105 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.772-201ENST00000606692 102 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 RMST_6.1-201ENST00000611980 203 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC240442.1-201ENST00000616055 283 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 LINC02555-201ENST00000563933 1951 ntBASIC3.23□□□□□ -1.89
NDC1Q9BTX1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NDC1Q9BTX1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC010680.1-201ENST00000590024 3590 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 SNORA38.1-201ENST00000364172 131 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.22□□□□□ -1.89
NDC1Q9BTX1 Y_RNA.416-201ENST00000384014 113 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RNU6-142P-201ENST00000384019 107 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 SNORA29-201ENST00000384183 140 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AL079342.1-201ENST00000401460 267 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RNU2-20P-201ENST00000410425 191 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RNA5SP120-201ENST00000410900 112 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 RNU2-64P-201ENST00000411315 191 ntBASIC3.22□□□□□ -1.89
NDC1Q9BTX1 AC023141.4-201ENST00000412031 328 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms