Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RNU5E-5P-201ENST00000365379 116 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RNU6-203P-201ENST00000384038 104 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RNU6-45P-201ENST00000384471 107 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RNU6-360P-201ENST00000390944 104 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RNU6-293P-201ENST00000411259 106 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AP000275.1-201ENST00000411943 390 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 OR6C66P-201ENST00000414917 930 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 MTATP6P16-201ENST00000434543 526 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC015922.2-201ENST00000435593 184 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 JTBP1-201ENST00000441314 247 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 SNRPEP8-201ENST00000442866 260 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC079448.1-201ENST00000449377 373 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RPS27AP8-201ENST00000452665 445 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 RNA5SP269-201ENST00000459032 137 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 SUMO2P18-201ENST00000518873 252 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC022616.3-201ENST00000523940 148 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC109446.1-201ENST00000566172 220 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AL590229.1-201ENST00000603497 542 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC112191.3-201ENST00000604371 277 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AL121992.2-201ENST00000606262 256 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AP000240.1-201ENST00000609910 452 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AL353770.2-201ENST00000620024 78 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AL121890.5-201ENST00000620848 304 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 MIR8063-201ENST00000621930 81 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 AC022513.1-201ENST00000624512 117 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 U6.114-201ENST00000636407 96 ntBASIC0.93□□□□□ -2.26
UPK3BQ9BT76 ICE2P2-201ENST00000483823 2787 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 MIR337-201ENST00000362281 93 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-500P-201ENST00000362349 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-37P-201ENST00000362692 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-11P-201ENST00000364234 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-1141P-201ENST00000364520 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-392P-201ENST00000364926 101 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 SNORD1A-201ENST00000364968 72 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 Y_RNA.324-201ENST00000365165 102 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 SNORD115-7-201ENST00000365306 82 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-25P-201ENST00000383873 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-1-201ENST00000383898 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-48P-201ENST00000384161 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-36P-201ENST00000384172 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-4P-201ENST00000384205 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-5P-201ENST00000384238 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-3P-201ENST00000384314 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-16P-201ENST00000384385 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-15P-201ENST00000384534 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-296P-201ENST00000384608 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-2-201ENST00000384627 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-29P-201ENST00000384637 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-9-201ENST00000384776 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-33P-201ENST00000384793 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU2-7P-201ENST00000410794 178 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL590135.1-201ENST00000422215 156 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC019205.3-201ENST00000424573 156 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC010975.2-201ENST00000427781 588 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL669831.1-202ENST00000428504 417 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC244670.1-201ENST00000436879 112 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC016700.2-201ENST00000446011 156 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU1-123P-201ENST00000458950 160 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RPS26P55-201ENST00000471178 356 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RPL26P26-201ENST00000480251 434 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC015911.1-201ENST00000495111 156 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC109479.2-201ENST00000517842 174 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RPL21P5-201ENST00000554662 472 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 MIR3660-201ENST00000584845 100 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC005771.1-201ENST00000585581 349 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC008752.3-201ENST00000588113 712 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC110760.3-201ENST00000598794 467 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 RNU6-6P-201ENST00000606623 107 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL451064.1-201ENST00000607718 471 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AL133173.2-201ENST00000614270 90 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC138649.3-201ENST00000622154 254 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC068205.3-201ENST00000636385 468 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 MTND5P9-201ENST00000503854 1755 ntBASIC0.92□□□□□ -2.26
UPK3BQ9BT76 AC091812.1-201ENST00000432235 1948 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 SNORD33-201ENST00000362761 85 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 RNU6-43P-201ENST00000384302 107 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 MIR520A-201ENST00000384862 85 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 MIR758-201ENST00000390227 88 ntBASIC0.91□□□□□ -2.26
UPK3BQ9BT76 SNORA40.6-201ENST00000391153 128 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms