Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AP000873.1-201ENST00000463987 400 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 RPS27AP10-201ENST00000496103 208 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 CYCSP23-201ENST00000519781 313 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 RPL21P9-201ENST00000556149 474 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 AC009163.5-201ENST00000575421 637 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 AL713866.2-201ENST00000603579 219 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 SNORA51-201ENST00000606420 132 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 AL359198.2-201ENST00000611836 194 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 AC010999.1-201ENST00000611856 324 ntBASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.22□□□□□ -1.73
ZKSCAN3Q9BRR0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.21□□□□□ -1.73
ZKSCAN3Q9BRR0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.21□□□□□ -1.73
ZKSCAN3Q9BRR0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 SNORA31-201ENST00000362607 130 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU1-18P-201ENST00000363062 164 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.435-201ENST00000384095 112 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 SNORA26.3-201ENST00000391119 136 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 RNA5SP129-201ENST00000410276 118 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 RN7SKP51-201ENST00000410781 304 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 RPS29P4-201ENST00000414733 161 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AC093578.1-201ENST00000415219 368 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AC005042.3-201ENST00000453230 174 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AP005660.1-201ENST00000522972 293 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AC008725.1-201ENST00000605123 2263 ntBASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.21□□□□□ -1.74
ZKSCAN3Q9BRR0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-873P-201ENST00000363833 107 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC112220.1-201ENST00000434628 355 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 UQCRBP2-201ENST00000447827 297 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 RPL23AP3-201ENST00000453844 468 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 RPL26P9-201ENST00000457466 433 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 snoU13.6-201ENST00000458785 104 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC084357.1-201ENST00000473404 255 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC233702.2-202ENST00000562547 291 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC022441.3-201ENST00000605737 136 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 MIR92B-201ENST00000607575 96 ntBASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.2□□□□□ -1.74
ZKSCAN3Q9BRR0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 RNA5SP322-201ENST00000363617 119 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 SNORA72.2-201ENST00000365028 127 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 CRYBB2P1-203ENST00000415709 538 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC138623.1-201ENST00000418060 216 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC012306.1-201ENST00000423267 114 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC010095.1-201ENST00000443543 144 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 HMGN2P10-201ENST00000448085 265 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC025518.1-201ENST00000479856 347 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC074133.1-201ENST00000515696 183 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU7-200P-201ENST00000516105 62 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 MIR548AI-201ENST00000579940 88 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC004832.4-201ENST00000608952 331 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AL357075.2-201ENST00000614906 189 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AC048347.1-201ENST00000624621 427 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 AP001486.2-201ENST00000561652 5113 ntBASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ZKSCAN3Q9BRR0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-704P-201ENST00000364162 103 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNA5SP42-201ENST00000364278 115 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-923P-201ENST00000364753 107 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.304-201ENST00000365011 112 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU6-487P-201ENST00000365430 104 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNA5SP167-201ENST00000365461 116 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 SNORD50.2-201ENST00000365465 70 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNA5SP390-201ENST00000410191 113 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 Y_RNA.597-201ENST00000410463 100 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RPL39P29-201ENST00000447779 157 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 RNU5F-8P-201ENST00000515941 111 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 MRPS18CP4-201ENST00000535821 231 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 AC011602.1-201ENST00000546484 331 ntBASIC4.18□□□□□ -1.74
ZKSCAN3Q9BRR0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms