Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-456P-201ENST00000384493 107 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RNU6-1274P-201ENST00000384557 107 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
FOXC2Q99958 AL353193.1-201ENST00000421444 268 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 USP9YP18-201ENST00000425912 695 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC010975.2-201ENST00000427781 588 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC245102.2-201ENST00000448956 180 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AL122001.1-201ENST00000457027 370 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC104136.1-201ENST00000512969 394 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC105417.1-201ENST00000514691 285 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RN7SKP298-201ENST00000515950 94 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 Y_RNA.687-201ENST00000516558 91 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RNU6-405P-201ENST00000516637 110 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 SNORA43.2-201ENST00000516652 128 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RN7SKP256-201ENST00000517201 314 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.58□□□□□ -2.16
FOXC2Q99958 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 BNIP3P6-201ENST00000549284 499 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC024909.2-201ENST00000553035 286 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 SUB1P2-201ENST00000556401 297 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 MIR4703-201ENST00000577728 79 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 MIR5089-201ENST00000580047 84 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 MIR4448-201ENST00000584360 86 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC087683.1-201ENST00000591187 441 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AL078605.1-201ENST00000603529 500 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 Z84480.1-201ENST00000605131 311 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC097065.2-201ENST00000608159 533 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC017083.3-201ENST00000609955 700 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC093783.1-201ENST00000612976 329 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 MIR6504-201ENST00000613520 61 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 RMST_7.1-201ENST00000621935 268 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC090517.3-201ENST00000625170 141 ntBASIC1.58□□□□□ -2.16
FOXC2Q99958 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.58□□□□□ -2.16
FOXC2Q99958 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.58□□□□□ -2.16
FOXC2Q99958 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
FOXC2Q99958 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.57□□□□□ -2.16
FOXC2Q99958 RNU4-40P-201ENST00000364351 143 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 RNU4-24P-201ENST00000364565 139 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 RNA5SP160-201ENST00000364866 120 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 RNU5A-6P-201ENST00000384136 116 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 MIR7-2-201ENST00000384970 110 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 MIR1283-2-201ENST00000408621 87 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 RNU2-66P-201ENST00000410650 161 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 BTF3L4P1-201ENST00000413813 468 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 RPL21P90-201ENST00000415692 466 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 AC105313.1-201ENST00000509121 353 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 MTND3P25-201ENST00000509243 135 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 AC087441.2-201ENST00000529141 262 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.57□□□□□ -2.16
FOXC2Q99958 AC022616.8-201ENST00000533569 253 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 ANP32BP3-201ENST00000559213 706 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.57□□□□□ -2.16
FOXC2Q99958 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 SNORA4-201ENST00000584302 138 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 MIR3611-201ENST00000584484 83 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC104073.3-201ENST00000610942 955 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 AC007792.1-201ENST00000623023 402 ntBASIC1.57□□□□□ -2.16
FOXC2Q99958 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXC2Q99958 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.57□□□□□ -2.16
FOXC2Q99958 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
FOXC2Q99958 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
FOXC2Q99958 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 RNU6-1158P-201ENST00000391167 107 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 RNA5SP465-201ENST00000391195 109 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AL663109.1-201ENST00000411498 844 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXC2Q99958 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXC2Q99958 AC003989.2-201ENST00000440224 169 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 USP9YP8-201ENST00000441913 500 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXC2Q99958 AP005639.2-201ENST00000527592 928 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC018630.3-201ENST00000542637 96 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXC2Q99958 AGGF1P4-201ENST00000568249 801 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXC2Q99958 MTND1P15-201ENST00000579262 949 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC008752.3-201ENST00000588113 712 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC078795.2-201ENST00000602835 1252 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC073648.5-201ENST00000603502 305 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AC004908.3-201ENST00000610248 625 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 AL159153.1-201ENST00000619688 317 ntBASIC1.56□□□□□ -2.16
FOXC2Q99958 uc_338.20-201ENST00000621563 178 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms