Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC100812.1-201ENST00000607622 580 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 U6.99-201ENST00000637524 83 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
ABCA3Q99758 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 RNU6-858P-201ENST00000362436 107 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 RNU4-79P-201ENST00000362764 141 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 RNU6-862P-201ENST00000362804 105 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA3Q99758 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA3Q99758 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.02□□□□□ -2.41
ABCA3Q99758 U7.7-201ENST00000459276 60 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 AP003049.1-201ENST00000529418 457 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 AL158211.1-201ENST00000566763 763 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 AC021506.2-201ENST00000612354 169 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 MIR4315-1-201ENST00000636800 73 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 MIR4315-2-201ENST00000640925 73 ntBASIC-0.02□□□□□ -2.41
ABCA3Q99758 RNU6-622P-201ENST00000384272 103 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 RNU6-950P-201ENST00000384651 107 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 PDCL2P1-201ENST00000419302 352 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 AL669831.1-202ENST00000428504 417 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 RPS26P48-201ENST00000491713 339 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 AC108740.1-201ENST00000498629 225 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 MTND5P13-201ENST00000513046 1079 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 RNU6-572P-201ENST00000516724 80 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA3Q99758 AC090615.1-201ENST00000577519 154 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 AC060771.1-201ENST00000582031 164 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 AC009032.1-201ENST00000617574 431 ntBASIC-0.03□□□□□ -2.41
ABCA3Q99758 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
ABCA3Q99758 MIR214-201ENST00000385214 110 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 COX6CP10-201ENST00000416832 224 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 MTCO1P57-201ENST00000432182 261 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.04□□□□□ -2.42
ABCA3Q99758 GTF2IP3-201ENST00000433887 494 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 RNU7-90P-201ENST00000459216 62 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 AC110760.3-202ENST00000515177 371 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 MIR548AX-201ENST00000580117 73 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 AC007363.1-201ENST00000604736 620 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 RAC1P9-201ENST00000604990 392 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 AC130324.3-201ENST00000614165 542 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
ABCA3Q99758 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 MIR7-1-201ENST00000384871 110 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 RNU2-23P-201ENST00000410545 195 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 MTCO2P5-201ENST00000422621 426 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.04□□□□□ -2.42
ABCA3Q99758 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA3Q99758 AC115989.2-201ENST00000578640 563 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 MIR371B-201ENST00000638082 66 ntBASIC-0.04□□□□□ -2.42
ABCA3Q99758 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 SNORA63D-201ENST00000364359 132 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 RNU6-432P-201ENST00000384196 109 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 AL590084.2-201ENST00000401481 382 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.05□□□□□ -2.42
ABCA3Q99758 RPS15AP10-201ENST00000432472 382 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.05□□□□□ -2.42
ABCA3Q99758 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.05□□□□□ -2.42
ABCA3Q99758 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.05□□□□□ -2.42
ABCA3Q99758 RNA5SP437-201ENST00000517249 129 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.05□□□□□ -2.42
ABCA3Q99758 AP002906.1-201ENST00000603405 233 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 SNRPGP20-201ENST00000604477 205 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 LARP7P1-201ENST00000605576 316 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 AC120349.3-201ENST00000624377 529 ntBASIC-0.05□□□□□ -2.42
ABCA3Q99758 RNU6-793P-201ENST00000384233 104 ntBASIC-0.06□□□□□ -2.42
ABCA3Q99758 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.06□□□□□ -2.42
ABCA3Q99758 MIR1468-201ENST00000410600 86 ntBASIC-0.06□□□□□ -2.42
ABCA3Q99758 BX664727.1-201ENST00000416024 466 ntBASIC-0.06□□□□□ -2.42
ABCA3Q99758 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.06□□□□□ -2.42
ABCA3Q99758 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.06□□□□□ -2.42
ABCA3Q99758 RPL39P38-201ENST00000467018 153 ntBASIC-0.06□□□□□ -2.42
ABCA3Q99758 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.06□□□□□ -2.42
ABCA3Q99758 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.06□□□□□ -2.42
ABCA3Q99758 AC136618.2-201ENST00000575091 400 ntBASIC-0.06□□□□□ -2.42
ABCA3Q99758 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 RNU4-45P-201ENST00000365469 141 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 RNU6-969P-201ENST00000383900 105 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.07□□□□□ -2.42
ABCA3Q99758 MTATP6P30-201ENST00000443540 664 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.07□□□□□ -2.42
ABCA3Q99758 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
ABCA3Q99758 AL590229.1-201ENST00000603497 542 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AC069114.2-201ENST00000604699 304 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 RNA5SP259-201ENST00000365541 109 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 USP9YP22-201ENST00000438971 294 ntBASIC-0.07□□□□□ -2.42
ABCA3Q99758 AC069257.2-201ENST00000441819 155 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms