Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.73□□□□□ -1.97
NPAS1Q99742 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS1Q99742 GSTA11P-201ENST00000452866 669 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS1Q99742 AC090525.1-201ENST00000479116 478 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 Y_RNA.661-201ENST00000516003 99 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 SNORA74D-201ENST00000516404 141 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.73□□□□□ -1.97
NPAS1Q99742 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.73□□□□□ -1.97
NPAS1Q99742 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.73□□□□□ -1.97
NPAS1Q99742 AC021231.3-201ENST00000558497 370 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 RPL30P11-203ENST00000598995 310 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 AL158827.2-201ENST00000602494 330 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 CYP2C61P-201ENST00000604072 290 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 AL691447.3-201ENST00000635020 330 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 SNORD98-201ENST00000636377 67 ntBASIC2.73□□□□□ -1.97
NPAS1Q99742 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NPAS1Q99742 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NPAS1Q99742 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS1Q99742 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
NPAS1Q99742 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS1Q99742 MIR369-201ENST00000362155 70 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RNU6-1159P-201ENST00000362933 107 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RNU6-1210P-201ENST00000363775 107 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RNU6-1286P-201ENST00000383871 107 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RNU6-700P-201ENST00000391043 107 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS1Q99742 RPL23AP95-201ENST00000426806 265 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 MTND1P14-201ENST00000427400 950 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AC011816.1-201ENST00000441346 546 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.72□□□□□ -1.97
NPAS1Q99742 RPS29P26-201ENST00000477483 171 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RPL23AP70-201ENST00000483361 460 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RPL30P1-201ENST00000488676 339 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AC022447.4-201ENST00000504053 364 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AC023141.11-201ENST00000508864 202 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 RNU6-470P-201ENST00000515954 104 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 SCARNA3-201ENST00000517097 143 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS1Q99742 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS1Q99742 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS1Q99742 AC027176.1-201ENST00000560204 514 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 AC093249.1-201ENST00000567049 203 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 MIR3136-201ENST00000583498 78 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NPAS1Q99742 MIR7157-201ENST00000635801 60 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
NPAS1Q99742 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS1Q99742 AC108206.1-201ENST00000570186 4159 ntBASIC2.72□□□□□ -1.97
NPAS1Q99742 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS1Q99742 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
NPAS1Q99742 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
NPAS1Q99742 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS1Q99742 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS1Q99742 snoU2_19.1-201ENST00000362361 80 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 RNU6-1285P-201ENST00000363480 105 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 SNORA29-201ENST00000384183 140 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 SNORA36A-201ENST00000384221 132 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 SNORA41-201ENST00000384675 132 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 MIR181B1-201ENST00000385240 110 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 EIF4EP4-201ENST00000424916 578 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS1Q99742 RPL17P19-201ENST00000489069 552 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.71□□□□□ -1.98
NPAS1Q99742 RNU7-175P-201ENST00000515915 61 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 RNU5F-2P-201ENST00000516066 82 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 RNU6-120P-201ENST00000516077 103 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 RNU6-567P-201ENST00000516746 107 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 Y_RNA.701-201ENST00000516812 110 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AL590705.4-201ENST00000532209 134 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.71□□□□□ -1.98
NPAS1Q99742 MIR4325-201ENST00000583049 90 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AC060766.3-201ENST00000591442 263 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AL162274.2-201ENST00000614406 332 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.71□□□□□ -1.98
NPAS1Q99742 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
NPAS1Q99742 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.98
NPAS1Q99742 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.71□□□□□ -1.98
NPAS1Q99742 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
NPAS1Q99742 Y_RNA.40-201ENST00000362645 93 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 RNU4-9P-201ENST00000364951 139 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 RNU6-1040P-201ENST00000383974 107 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 AF228730.4-201ENST00000421457 183 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.7□□□□□ -1.98
NPAS1Q99742 AC092423.1-201ENST00000430165 186 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 RN7SKP210-201ENST00000459176 261 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 AL121594.1-201ENST00000475906 575 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 RNU6-1153P-201ENST00000516760 105 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 SNORA31.16-201ENST00000516773 139 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NPAS1Q99742 MIR5696-201ENST00000578474 85 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 MIR3923-201ENST00000579521 83 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 AC069294.1-201ENST00000608397 350 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms